RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 KEAP1Q14145 624 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 PTGES3Q15185 160 aaKnown RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 TMEM44Q2T9K0 475 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 PDSS1Q5T2R2 415 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 FAM69AQ5T7M9 428 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 C1orf140Q5VVS0 124 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 C3orf33Q6P1S2 294 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 MAMDC2Q7Z304 686 aaPredicted RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 DEPDC4Q8N2C3 294 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 MFSD8Q8NHS3 518 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 TEX47Q8TBZ9 253 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 HRASLS5Q96KN8 279 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 GABARAPL3Q9BY60 117 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 GRIP2Q9C0E4 1043 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 OR2B2Q9GZK3 357 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 FKRPQ9H9S5 495 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 REV1Q9UBZ9 1251 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 ZNF229Q9UJW7 825 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 BAIAP2Q9UQB8 552 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 GMPPBQ9Y5P6 360 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 CORINQ9Y5Q5 1042 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 AP4B1Q9Y6B7 739 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 MPDZO75970 2070 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 TMEM72A0PK05 275 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 OR2M5A3KFT3 312 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ENO4A6NNW6 628 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 C17orf51A8MQB3 221 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 C1QTNF9BB2RNN3 333 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 KLF4O43474 513 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 MPZL2O60487 215 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 MITFO75030 526 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 OR7A10O76100 309 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 GLSO94925 669 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 C1QTNF9P0C862 333 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 PEPDP12955 493 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 MAKP20794 623 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 GTF2E2P29084 291 aaKnown RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 GPR4P46093 362 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 SMSP52788 366 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 CDC42P60953 191 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 PPIAP62937 165 aaKnown RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 CXADRP78310 365 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 EGR4Q05215 589 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 FOXF1Q12946 379 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 GINS1Q14691 196 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ZNF169Q14929 603 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 BCL2A1Q16548 175 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ZNF74Q16587 644 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 TMEM176BQ3YBM2 270 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 CMPK2Q5EBM0 449 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 C6orf52Q5T4I8 152 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 RAET1LQ5VY80 246 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ANKRD34AQ69YU3 496 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 RPUSD3Q6P087 351 aaKnown RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 SLC27A4Q6P1M0 643 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 SMARCD3Q6STE5 483 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 CASP12Q6UXS9 341 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 Q6ZS92 163 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 LURAP1LQ8IV03 231 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 KDF1Q8NAX2 398 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 FAM83FQ8NEG4 500 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 ATP6V1C2Q8NEY4 427 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 OR52L1Q8NGH7 329 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 OR51A7Q8NH64 312 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 PFN4Q8NHR9 129 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 POC1BQ8TC44 478 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ZCCHC14Q8WYQ9 949 aaKnown RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 TAAR8Q969N4 342 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 KTI12Q96EK9 354 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ASPNQ9BXN1 380 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 TTTY12Q9BZ98 90 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 PRRG3Q9BZD7 231 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 ADNPQ9H2P0 1102 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 TIGARQ9NQ88 270 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 C20orf141Q9NUB4 165 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 TUBD1Q9UJT1 453 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 RPH3AQ9Y2J0 694 aaPredicted RBP9.33□□□□□ -0.92
MDC1-205ENST00000425072 LRCH1Q9Y2L9 728 aa9.33□□□□□ -0.92
MDC1-205ENST00000425072 IGKV1D-42A0A075B6H8 117 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 PINLYPA6NC86 204 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 LRRC3CA6NJW4 275 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 B4DXG7 233 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 SULT2B1O00204 365 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 TAF4O00268 1085 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 IDH3BO43837 385 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 EFNA2O43921 213 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 PIP5K1CO60331 668 aa9.32□□□□□ -0.92
MDC1-205ENST00000425072 EIF1BO60739 113 aaKnown RBP9.32□□□□□ -0.92
MDC1-205ENST00000425072 NDUFB2O95178 105 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms