RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NTF4P34130 210 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 ATP5J2P56134 94 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 MTPNP58546 118 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 RAC3P60763 192 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 CDK6Q00534 326 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 PLAURQ03405 335 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 CYP51A1Q16850 503 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 STK32CQ86UX6 486 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 CMIPQ8IY22 773 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 BBS10Q8TAM1 723 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 IKZF5Q9H5V7 419 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 A4GALTQ9NPC4 353 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 EXOSC3Q9NQT5 275 aaKnown RBP11.47□□□□□ -0.57
VRK3-203ENST00000424804 TMEM45AQ9NWC5 275 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 PRSS50Q9UI38 385 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 CORO2BQ9UQ03 480 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
VRK3-203ENST00000424804 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 SULT2B1O00204 365 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 FRS3O43559 492 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CYTIPO60759 359 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 ADAM11O75078 769 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 NDUFS7O75251 213 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 PGM3O95394 542 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 PABPC4LP0CB38 370 aaKnown RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 ARAFP10398 606 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 SLC6A2P23975 617 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 OR3A2P47893 321 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 COPZ1P61923 177 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 KLF10Q13118 480 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 ITGADQ13349 1161 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 SCARB2Q14108 478 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 SELPLGQ14242 412 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 SYT14P1Q58G82 188 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 RUNDC3AQ59EK9 446 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 DLEU7Q6UYE1 221 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CLIP4Q8N3C7 705 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 HSD17B8Q92506 261 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 ZNF300Q96RE9 604 aaPredicted RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 CGREF1Q99674 301 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CPPED1Q9BRF8 314 aaPredicted RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 TRIM2Q9C040 744 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 OR11A1Q9GZK7 315 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CXorf56Q9H5V9 222 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 PIF1Q9H611 641 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CCDC134Q9H6E4 229 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 ARMC7Q9H6L4 198 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 CHRNA9Q9UGM1 479 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 IFT52Q9Y366 437 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
VRK3-203ENST00000424804 MAGED1Q9Y5V3 778 aaPredicted RBP11.46□□□□□ -0.57
VRK3-203ENST00000424804 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 TMED7-TICAM2A0A0A6YYA0 188 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 LOC100653049A0A140TA62 436 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CDHR4A6H8M9 788 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 RAMP1O60894 148 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CRLF1O75462 422 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 KRT34O76011 436 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 PRG2P13727 222 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 TACR3P29371 465 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CDKN1AP38936 164 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 DIO1P49895 249 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 POLR2HP52434 150 aaKnown RBP11.45□□□□□ -0.58
VRK3-203ENST00000424804 OR2B6P58173 313 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 RPS4XP62701 263 aaKnown RBP11.45□□□□□ -0.58
VRK3-203ENST00000424804 HOXC5Q00444 222 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 EPS8Q12929 822 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 P2RY6Q15077 328 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 MAPRE2Q15555 327 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CLEC12BQ2HXU8 276 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 ALKBH2Q6NS38 261 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 REEP3Q6NUK4 255 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 Q6ZT83 130 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SNX32Q86XE0 403 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 KRT73Q86Y46 540 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 ZNF440Q8IYI8 595 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SLC43A2Q8N370 569 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 KBTBD8Q8NFY9 601 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SMAP2Q8WU79 429 aaPredicted RBP11.45□□□□□ -0.58
VRK3-203ENST00000424804 PMM1Q92871 262 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 ANKRD27Q96NW4 1050 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 CCDC106Q9BWC9 280 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SPATA9Q9BWV2 254 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 FANCFQ9NPI8 374 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 SAR1AQ9NR31 198 aa11.45□□□□□ -0.58
VRK3-203ENST00000424804 NPAP1Q9NZP6 1156 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms