RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 CD22P20273 847 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 HIST1H1TP22492 207 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CPT2P23786 658 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 GDF1P27539 372 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CCKARP32238 428 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ANP32AP39687 249 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CASP3P42574 277 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 RPL21P46778 160 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ARFIP1P53367 373 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PGGT1BP53609 377 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 DIO3P55073 304 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CDH12P55289 794 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PLIN5Q00G26 463 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ID2Q02363 134 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TGM3Q08188 693 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ITGADQ13349 1161 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 RCAN2Q14206 197 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 KCTD19Q17RG1 926 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TMEM35AQ53FP2 167 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 EIPR1Q53HC9 387 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CEP78Q5JTW2 689 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CDKL4Q5MAI5 379 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TIGD3Q6B0B8 471 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ADNP2Q6IQ32 1131 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TTC27Q6P3X3 843 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PODNL1Q6PEZ8 512 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 RBPMS2Q6ZRY4 209 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 KIAA1328Q86T90 577 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PATL1Q86TB9 770 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 LUZP2Q86TE4 346 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ST13P4Q8IZP2 240 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 BOLLQ8N9W6 283 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 SCCPDHQ8NBX0 429 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 FAM83FQ8NEG4 500 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 C17orf47Q8NEP4 570 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ZNF473Q8WTR7 871 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 MAIP1Q8WWC4 291 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 SLC44A1Q8WWI5 657 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TMEM158Q8WZ71 300 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TANKQ92844 425 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ADIPOR1Q96A54 375 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 ART5Q96L15 291 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 RILPQ96NA2 401 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 RUNDC3BQ96NL0 473 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 WFIKKN1Q96NZ8 548 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 F2RL3Q96RI0 385 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CCL19Q99731 98 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PELOQ9BRX2 385 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TMEM204Q9BSN7 226 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 EFCAB11Q9BUY7 163 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CAPS2Q9BXY5 557 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 MS4A8Q9BY19 250 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 OR2B2Q9GZK3 357 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 MAGIXQ9H6Y5 334 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 HINT3Q9NQE9 182 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CISD1Q9NZ45 108 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 C6orf203Q9P0P8 240 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 OSGIN1Q9UJX0 560 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 SLC6A5Q9Y345 797 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 NCKAP5O14513 1909 aa4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 CHD3Q12873 2000 aaKnown RBP4.12□□□□□ -1.75
CDC42EP3-202ENST00000422687 TGP01266 2768 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 IQANK1A0A1B0GTG1 560 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 FRG2CA6NGY1 282 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 ANKDD1BA6NHY2 528 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 GOLGA8MH3BSY2 632 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 VCYO14598 125 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 SMAD9O15198 467 aaKnown RBP4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TAPBPO15533 448 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TLX2O43763 284 aaPredicted RBP4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TRAPPC6AO75865 159 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 LRATO95237 230 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 GPR75O95800 540 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TGM6O95932 706 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 CGAP01215 116 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 KRT14P02533 472 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 RHOXF2BP0C7M4 288 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 UGT2B10P36537 528 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 CD79BP40259 229 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 PTGDSP41222 190 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 MSH2P43246 934 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 LHX2P50458 406 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 ELLP55199 621 aaPredicted RBP4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 FBXW4P57775 412 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 HERVK_113P63132 956 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 ERVK-8P63133 956 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 DMTNQ08495 405 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 SNTA1Q13424 505 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TNK1Q13470 666 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 DOC2AQ14183 400 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 TRIP13Q15645 432 aaPredicted RBP4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 ETFDHQ16134 617 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 BCL2A1Q16548 175 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 C18orf21Q32NC0 220 aaPredicted RBP4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 SPANXN3Q5MJ09 141 aa4.11□□□□□ -1.75
CDC42EP3-202ENST00000422687 FAM45BPQ6NSW5 357 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms