RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 TP53P04637 393 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ITGA5P08648 1049 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 IMPDH2P12268 514 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 CD40P25942 277 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 NTF4P34130 210 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ACVR1BP36896 505 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF83P51522 516 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 CRISP3P54108 245 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC18A1P54219 525 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 WDR4P57081 412 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 TGFBR3Q03167 851 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC17A1Q14916 467 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ZSWIM7Q19AV6 140 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 NXNQ6DKJ4 435 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC22A25Q6T423 547 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 DNM1P46Q6ZS02 220 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 DEPDC4Q8N2C3 294 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 PIAS4Q8N2W9 510 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 MAELQ96JY0 434 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ADAD1Q96M93 576 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 MUS81Q96NY9 551 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 DHRS9Q9BPW9 319 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 SF3B5Q9BWJ5 86 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 PIF1Q9H611 641 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 RMND5AQ9H871 391 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 CACYBPQ9HB71 228 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 THUMPD1Q9NXG2 353 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 UPB1Q9UBR1 384 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 POU2F3Q9UKI9 436 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 AMDHD2Q9Y303 409 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 CR1P17927 2039 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 A0A096LPI6 279 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZC3H12DA2A288 527 aaKnown RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM247A6NEH6 219 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 LIPT2A6NK58 231 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF500O60304 480 aaPredicted RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 CRLF1O75462 422 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ANP32DO95626 131 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 BCHEP06276 602 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 GPIP06744 558 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZCCHC18P0CG32 403 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 KITP10721 976 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 CXCR1P25024 350 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 TTKP33981 857 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 MVDP53602 400 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 DSTNP60981 165 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 COPZ1P61923 177 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 SPOCK1Q08629 439 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 LARS2Q15031 903 aaKnown RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 GABRA6Q16445 453 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 OTUD3Q5T2D3 398 aaPredicted RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 WBP2NLQ6ICG8 309 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF544Q6NX49 715 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF836Q6ZNA1 936 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 FBXL14Q8N1E6 418 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 POMGNT2Q8NAT1 580 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 OR52E4Q8NGH9 312 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 OR52P1PQ8NH57 321 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 MGARPQ8TDB4 240 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ITCHQ96J02 903 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 CACNG6Q9BXT2 260 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ADAM19Q9H013 955 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ARMC7Q9H6L4 198 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 TPT1P8Q9HAU6 139 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC17A5Q9NRA2 495 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 SDR39U1Q9NRG7 319 aaPredicted RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 CBLN4Q9NTU7 201 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF443Q9Y2A4 671 aaPredicted RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ABCA1O95477 2261 aa10.15□□□□□ -0.78
SQSTM1-203ENST00000422245 ATRQ13535 2644 aa10.15□□□□□ -0.79
SQSTM1-203ENST00000422245 A0A1W2PR80 420 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 FAM234BA2RU67 622 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 AQP7P3A6NL99 342 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 A8MVM7 634 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 KIAA1324LA8MWY0 1029 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 E7EQL1 145 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 M0R1B8 84 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 FRS3O43559 492 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 TLX2O43763 284 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 NDUFS7O75251 213 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 TFPTP0C1Z6 253 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 ETFAP13804 333 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 MPGP29372 298 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 CRATP43155 626 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 NUDT6P53370 316 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 DSCR9P59020 149 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 CEACAM7Q14002 265 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 OR7A5Q15622 319 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 MAPK11Q15759 364 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 TSPO2Q5TGU0 170 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 C11orf71Q6IPW1 123 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 KLHL24Q6TFL4 600 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 B3GLCTQ6Y288 498 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 ABHD12BQ7Z5M8 362 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 VRK2Q86Y07 508 aa10.14□□□□□ -0.79
SQSTM1-203ENST00000422245 MUC15Q8N387 334 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms