RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 DOK1Q99704 481 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 SYT3Q9BQG1 590 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 FZD7O75084 574 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 UTS2O95399 124 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 ETHE1O95571 254 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 RAB3DO95716 219 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 CEACAM5P06731 702 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 EIF1P41567 113 aaKnown RBP13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 PRKXP51817 358 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 C14orf28Q4W4Y0 310 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 AWAT2Q6E213 333 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 SLC16A9Q7RTY1 509 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 FAM160A2Q8N612 972 aaPredicted RBP13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 TMEM255BQ8WV15 326 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 STARD5Q9NSY2 213 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 RNF215Q9Y6U7 377 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 DIRAS3O95661 229 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 CD160O95971 181 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 GALP22466 123 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 HMGA2P52926 109 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 DUSP5Q16690 384 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 KIF18BQ86Y91 864 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 OR5H2Q8NGV7 314 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 LDAHQ9H6V9 325 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 FTSJ1Q9UET6 329 aa13.71□□□□□ -0.21
AP000550.1-201ENST00000420508 C13orf42A0A1B0GVH6 325 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 PBX2P40425 430 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 ASAH1Q13510 395 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 GRK1Q15835 563 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 PARM1Q6UWI2 310 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 PHC2Q8IXK0 858 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF615Q8N8J6 731 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 OR13H1Q8NG92 308 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC35A4Q96G79 324 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 OR10A4Q9H209 315 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 CHST8Q9H2A9 424 aa13.71□□□□□ -0.22
AP000550.1-201ENST00000420508 RAF1P04049 648 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 THBS2P35442 1172 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 WNT3P56703 355 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 RAP2BP61225 183 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 PCBD1P61457 104 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 FAM53BQ14153 422 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 FCRLBQ6BAA4 426 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 KCTD9Q7L273 389 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 MSRB3Q8IXL7 192 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF471Q9BX82 626 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 F5H5P2 479 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ARSBP15848 533 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 TPBGQ13641 420 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 CCDC54Q8NEL0 328 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC37A2Q8TED4 501 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 FCRL1Q96LA6 429 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 A0A1B0GTW7 788 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 A8MVM7 634 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ZNF736B4DX44 427 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 HTR2AP28223 471 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 GALK2Q01415 458 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 CRMP1Q14194 572 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 CNN3Q15417 329 aaKnown RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 CD300LDQ6UXZ3 194 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 NKAIN3Q8N8D7 197 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ARHGDIGQ99819 225 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 WDR77Q9BQA1 342 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 OR10A2Q9H208 303 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC16A7O60669 478 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 TACR3P29371 465 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 SLC19A1P41440 591 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 S100A10P60903 97 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 SF3B4Q15427 424 aaKnown RBP eCLIP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ABHD12BQ7Z5M8 362 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 ZSCAN4Q8NAM6 433 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 STOML3Q8TAV4 291 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 C7orf34Q96L11 122 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 MMP28Q9H239 520 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 PCDHGA3Q9Y5H0 932 aa13.7□□□□□ -0.22
AP000550.1-201ENST00000420508 SULT2B1O00204 365 aa13.69□□□□□ -0.22
AP000550.1-201ENST00000420508 SDC3O75056 442 aa13.69□□□□□ -0.22
AP000550.1-201ENST00000420508 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms