RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NKX6-2Q9C056 277 aaPredicted RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 SRRQ9GZT4 340 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 MED28Q9H204 178 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ANKRD19PQ9H560 264 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 DUSP21Q9H596 190 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ASB7Q9H672 318 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 EML4Q9HC35 981 aaKnown RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 VAT1LQ9HCJ6 419 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 HHATLQ9HCP6 504 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 MRPS30Q9NP92 439 aaKnown RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 IL1RAPQ9NPH3 570 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ACOT13Q9NPJ3 140 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 NIT2Q9NQR4 276 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 RBFOX1Q9NWB1 397 aaKnown RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 TREM2Q9NZC2 230 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 GDE1Q9NZC3 331 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF624Q9P2J8 865 aaPredicted RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 MIOXQ9UGB7 285 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 EMCNQ9ULC0 261 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 MGAT4AQ9UM21 535 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 PLEKHA6Q9Y2H5 1048 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC6A5Q9Y345 797 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 KLK4Q9Y5K2 254 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 SMAD5-AS1Q9Y6J3 95 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.93
SDCBPP3-201ENST00000419629 BCORQ6W2J9 1755 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 TP53BP1Q12888 1972 aaPredicted RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 FAM240BA0A1B0GVZ2 78 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 FAM149AA5PLN7 773 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ANKDD1BA6NHY2 528 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ACOD1A6NK06 481 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RFPL4AA6NLU0 287 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RFPL4AL1F8VTS6 287 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 APOC4-APOC2K7ER74 178 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RTCAO00442 366 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PDCD5O14737 125 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PRMT5O14744 637 aaPredicted RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 FPGTO14772 594 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC7A4O43246 635 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SSX4O60224 188 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 LCMT2O60294 686 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 DOK2O60496 412 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SELENOFO60613 162 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 EIF3GO75821 320 aaKnown RBP eCLIP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PGLSO95336 258 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PTBP3O95758 552 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 LSM8O95777 96 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SERPINA1P01009 418 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 HLA-DQB1P01920 261 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 MBP02144 154 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 APOC2P02655 101 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 MT-ND2P03891 347 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RLN2P04090 185 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 HMBSP08397 361 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF883P0CG24 379 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 CLUP10909 449 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ETS1P14921 441 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 TSPAN8P19075 237 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 TPSB2P20231 275 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PAICSP22234 425 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 LHCGRP22888 699 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 GADD45AP24522 165 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ATP5A1P25705 553 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 NMBRP28336 390 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 LAP3P28838 519 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PBLDP30039 288 aaPredicted RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 DCTP40126 519 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ACTR1BP42025 376 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 CDKN2BP42772 138 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAGEA2P43356 314 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAGEA12P43365 314 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 CASP4P49662 377 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 HNMTP50135 292 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RORCP51449 518 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 VAMP7P51809 220 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ACLYP53396 1101 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAZP56270 477 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 HUNKP57058 714 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 RAB2AP61019 212 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 HNRNPKP61978 463 aaKnown RBP eCLIP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SIRPAP78324 504 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PSPHP78330 225 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 GCNT1Q02742 428 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 CHRNB3Q05901 458 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SPP2Q13103 211 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 GPR17Q13304 367 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 DPYSL3Q14195 570 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 PRPSAP1Q14558 356 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SF3A2Q15428 464 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 TPSAB1Q15661 275 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 WSCD2Q2TBF2 565 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 CTU2Q2VPK5 515 aaKnown RBP3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF528Q3MIS6 628 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF876PQ49A33 203 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 AGKQ53H12 422 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 WDR38Q5JTN6 314 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 SAPCD1Q5SSQ6 148 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
SDCBPP3-201ENST00000419629 AVPI1Q5T686 147 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms