RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 MAP2K4P45985 399 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ST13P50502 369 aaKnown RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SSR4P51571 173 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 POLR2HP52434 150 aaKnown RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TMBIM6P55061 237 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SH3BGRP55822 239 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SUMO3P55854 103 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 PRPS1P60891 318 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 EFNB1P98172 346 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF91Q05481 1191 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SSPNQ14714 243 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 QPRTQ15274 297 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TBCEQ15813 527 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ANKDD1AQ495B1 522 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 C3orf38Q5JPI3 329 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 GPR107Q5VW38 600 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 XAF1Q6GPH4 301 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ARHGAP11AQ6P4F7 1023 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 C5orf46Q6UWT4 87 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 B3GNT6Q6ZMB0 384 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 CCDC81Q6ZN84 652 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 HIST3H2AQ7L7L0 130 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 RAB43Q86YS6 212 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 LNX2Q8N448 690 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 DEFB124Q8NES8 71 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 NLGN4YQ8NFZ3 816 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 OR11G2Q8NGC1 345 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 OR13F1Q8NGS4 319 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 OR13C2Q8NGS9 318 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 OR51A7Q8NH64 312 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 GPR119Q8TDV5 335 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 FAR1Q8WVX9 515 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TMEM234Q8WY98 164 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 HIST1H2ACQ93077 130 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SPACA9Q96E40 222 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TMEM80Q96HE8 168 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF582Q96NG8 517 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TNFRSF13CQ96RJ3 184 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 RASL10BQ96S79 203 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TSC22D3Q99576 134 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 CDCA4Q9BXL8 241 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SPRY4Q9C004 299 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 LHPPQ9H008 270 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 FN3KQ9H479 309 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF160Q9HCG1 818 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 ACOT13Q9NPJ3 140 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 CHCHD3Q9NX63 227 aaKnown RBP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 TAS2R10Q9NYW0 307 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 PPP4R1LQ9P1A2 415 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 IL20RAQ9UHF4 553 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.04□□□□□ -1.44
HDAC8-211ENST00000415409 SIGLEC7Q9Y286 467 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 COMMD3-BMI1R4GMX3 469 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 CACNA1EQ15878 2313 aa6.04□□□□□ -1.44
HDAC8-211ENST00000415409 MYO15AQ9UKN7 3530 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 IGKV1D-42A0A075B6H8 117 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 TRAV36DV7A0A075B6V5 113 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 TRAV27A0A087WT01 109 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 TMED7-TICAM2A0A0A6YYA0 188 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 PMS2P1A4D2B8 440 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 KDM4EB2RXH2 506 aaPredicted RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 STMND1H3BQB6 276 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 BHLHE40O14503 412 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 IDH3BO43837 385 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 GMFGO60234 142 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 RAD1O60671 282 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 ITGA10O75578 1167 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 INMTO95050 263 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 RAB36O95755 333 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 HPP00738 406 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 STSP08842 583 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 DBTP11182 482 aaKnown RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 PEPDP12955 493 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF3P17036 446 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 NAT1P18440 290 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 PAICSP22234 425 aaKnown RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 DCKP27707 260 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 NOS3P29474 1203 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 C21orf33P30042 268 aaPredicted RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 GSTT1P30711 240 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 RPL4P36578 427 aaKnown RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 APOBEC1P41238 236 aaKnown RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 SLC15A1P46059 708 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 MTNR1AP48039 350 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF41P51814 821 aaPredicted RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 MLLT10P55197 1068 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 CDH11P55287 796 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 RAB40BQ12829 278 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 SNTA1Q13424 505 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 TMED1Q13445 227 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 DNASE1L3Q13609 305 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 ZNF74Q16587 644 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 NTRK2Q16620 822 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 COL28A1Q2UY09 1125 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 CRTC2Q53ET0 693 aaPredicted RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 SYT14P1Q58G82 188 aa6.03□□□□□ -1.44
HDAC8-211ENST00000415409 SYT6Q5T7P8 510 aaPredicted RBP6.03□□□□□ -1.44
HDAC8-211ENST00000415409 UBE2UQ5VVX9 321 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms