RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PSMD4P55036 377 aaKnown RBP10.63□□□□□ -0.71
RFFL-205ENST00000415395 SLC37A1P57057 533 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 C19orf57Q0VDD7 668 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
RFFL-205ENST00000415395 SLC38A9Q8NBW4 561 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 ANGPTL6Q8NI99 470 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 DOK4Q8TEW6 326 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 ACOT11Q8WXI4 607 aaPredicted RBP10.63□□□□□ -0.71
RFFL-205ENST00000415395 TM9SF4Q92544 642 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 CMKLR1Q99788 373 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 ATF6BQ99941 703 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 MARVELD1Q9BSK0 173 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 STRADBQ9C0K7 418 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 RERGLQ9H628 205 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 INPP5EQ9NRR6 644 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 PTTG3PQ9NZH4 202 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 CTSFQ9UBX1 484 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 NXT1Q9UKK6 140 aaKnown RBP10.63□□□□□ -0.71
RFFL-205ENST00000415395 CBLCQ9ULV8 474 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 CARD8Q9Y2G2 431 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 ALG5Q9Y673 324 aa10.63□□□□□ -0.71
RFFL-205ENST00000415395 VPS13AQ96RL7 3174 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 A0A087WUU8 490 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 HRKO00198 91 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 GABRPO00591 440 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 HPGDSO60760 199 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 OR5F1O95221 314 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 DDAH2O95865 285 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 IGHA1P01876 353 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 LIMS3P0CW19 117 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 LIMS4P0CW20 117 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 CT45A8P0DMV1 189 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 CT45A9P0DMV2 189 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 PAICSP22234 425 aaKnown RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 LCN1P31025 176 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 PPICP45877 212 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 TAS2R43P59537 309 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 RRAS2P62070 204 aaPredicted RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 EEF1A1P68104 462 aaKnown RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 GPR68Q15743 365 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 CSRP2Q16527 193 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFFL-205ENST00000415395 PGGHGQ32M88 737 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 HSD17B12Q53GQ0 312 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 CT45A2Q5DJT8 189 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 ZNF57Q68EA5 555 aaPredicted RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 PLEKHM3Q6ZWE6 761 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 OLIG3Q7RTU3 272 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 LRRC28Q86X40 367 aaPredicted RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 VRK2Q86Y07 508 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 KIF18BQ86Y91 864 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 YIPF7Q8N8F6 280 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 OR2T33Q8NG76 320 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 SLC2A12Q8TD20 617 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 DNAJA4Q8WW22 397 aaPredicted RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 HYLS1Q96M11 299 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 TM9SF2Q99805 663 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 EGLN3Q9H6Z9 239 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 WDR54Q9H977 334 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 APMAPQ9HDC9 416 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 TNFRSF10DQ9UBN6 386 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 COPS7AQ9UBW8 275 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 GPR55Q9Y2T6 319 aaPredicted RBP10.62□□□□□ -0.71
RFFL-205ENST00000415395 PCDHGA1Q9Y5H4 931 aa10.62□□□□□ -0.71
RFFL-205ENST00000415395 GXYLT2A0PJZ3 443 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 FRG2CA6NGY1 282 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 MEN1O00255 615 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 SURF4O15260 269 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 RFPL3O75679 317 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 DHFRP00374 187 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 PRKCAP17252 672 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 DRD5P21918 477 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 APEX1P27695 318 aaKnown RBP10.61□□□□□ -0.71
RFFL-205ENST00000415395 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
RFFL-205ENST00000415395 TGM4P49221 684 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 EFR3AQ14156 821 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.61□□□□□ -0.71
RFFL-205ENST00000415395 FLYWCH1Q4VC44 716 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 CCNJQ5T5M9 372 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 RPL13AP3Q6NVV1 102 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 NPSR1Q6W5P4 371 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 ZNF836Q6ZNA1 936 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 COMTD1Q86VU5 262 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 TPRA1Q86W33 373 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 GRAMD2AQ8IUY3 354 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 C17orf47Q8NEP4 570 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 OR1N1Q8NGS0 311 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 ATOH1Q92858 354 aaPredicted RBP10.61□□□□□ -0.71
RFFL-205ENST00000415395 ZG16BQ96DA0 208 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 FYTTD1Q96QD9 318 aaKnown RBP10.61□□□□□ -0.71
RFFL-205ENST00000415395 UBL7Q96S82 380 aaPredicted RBP10.61□□□□□ -0.71
RFFL-205ENST00000415395 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 HDHD2Q9H0R4 259 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 FN3KQ9H479 309 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 SEMA4GQ9NTN9 838 aa10.61□□□□□ -0.71
RFFL-205ENST00000415395 MRTO4Q9UKD2 239 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms