RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KCNMB2Q9Y691 235 aa14.13□□□□□ -0.15
SHMT2-202ENST00000414700 A3GALT2U3KPV4 340 aa14.13□□□□□ -0.15
SHMT2-202ENST00000414700 TNRC6AQ8NDV7 1962 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 TP53I11O14683 189 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 BCKDKO14874 412 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DPM1O60762 260 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 WDPCPO95876 746 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 H1F0P07305 194 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 ELAVL4P26378 380 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DNAJA1P31689 397 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 UGT2B10P36537 528 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CD96P40200 585 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SOX8P57073 446 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DEFA1P59665 94 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DEFA3P59666 94 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF45Q02386 682 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 RFX4Q33E94 735 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 WDR88Q6ZMY6 472 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 GDF7Q7Z4P5 450 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CYP4Z1Q86W10 505 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 NKAIN4Q8IVV8 208 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CADM2Q8N3J6 435 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SETD9Q8NE22 299 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 FDCSPQ8NFU4 85 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 TRIM63Q969Q1 353 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SIGLEC12Q96PQ1 595 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 EPYCQ99645 322 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 LAT2Q9GZY6 243 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DUSP21Q9H596 190 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DKK4Q9UBT3 224 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SLC7A7Q9UM01 511 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 WIF1Q9Y5W5 379 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 NCKAP5O14513 1909 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 A0A0G2JMM0 328 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 A0A1B0GWA3 101 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 A0A1W2PPB8 328 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 A0A1W2PRS3 328 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 KIR3DP1A8MWS1 328 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 EFCAB9A8MZ26 197 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 MRPS14O60783 128 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 IDH2P48735 452 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 MASP1P48740 699 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CYB561P49447 251 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CLK3P49761 638 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 HMGA2P52926 109 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 IL5RAQ01344 420 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 PRKCDQ05655 676 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 COL28A1Q2UY09 1125 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SLC22A10Q63ZE4 541 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SHQ1Q6PI26 577 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 RFPL4BQ6ZWI9 263 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 GDPD3Q7L5L3 318 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF550Q7Z398 422 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 OR9Q2Q8NGE9 314 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 OR5K1Q8NHB7 308 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 CNIH3Q8TBE1 160 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 SLC41A3Q96GZ6 507 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 DCSTAMPQ9H295 470 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 EXOSC3Q9NQT5 275 aaKnown RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 QPCTLQ9NXS2 382 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 MED11Q9P086 117 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 PDP1Q9P0J1 537 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-202ENST00000414700 ORC6Q9Y5N6 252 aa14.12□□□□□ -0.15
SHMT2-202ENST00000414700 LOC105371267A0A1B0GV96 52 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 NEURL1O76050 574 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 LYPD3O95274 346 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 NUDT14O95848 222 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 APOA1P02647 267 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 FPR1P21462 350 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 ITPKBP27987 946 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 TGFBR2P37173 567 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 SLC35A2P78381 396 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 C17orf67Q0P5P2 114 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 ZSWIM7Q19AV6 140 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 ZFP69Q49AA0 526 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 CCDC81Q6ZN84 652 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 LSMEM1Q8N8F7 131 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 PSD4Q8NDX1 1056 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 NPAS1Q99742 590 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 PRSS27Q9BQR3 290 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 FUZQ9BT04 418 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 HES7Q9BYE0 225 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 DDX28Q9NUL7 540 aaKnown RBP14.11□□□□□ -0.15
SHMT2-202ENST00000414700 SCN3BQ9NY72 215 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 LRFN1Q9P244 771 aa14.11□□□□□ -0.15
SHMT2-202ENST00000414700 A0A0B4J2E0 115 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 A0A1B0GX12 115 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 A0A1W2PRQ8 180 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 TRAPPC13A5PLN9 417 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 C1QTNF9BB2RNN3 333 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 EIF4E2O60573 245 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 FMO6PO60774 539 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 MT-ND2P03891 347 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 C1QTNF9P0C862 333 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 GPR85P60893 370 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CXCR4P61073 352 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 TLE3Q04726 772 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 C19orf57Q0VDD7 668 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms