RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 IKZF5Q9H5V7 419 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 NGBQ9NPG2 151 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 PARPBPQ9NWS1 579 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ADPRHL2Q9NX46 363 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 SELENONQ9NZV5 590 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 PRSS50Q9UI38 385 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ING1Q9UK53 422 aaPredicted RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 CHST2Q9Y4C5 530 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 F8P00451 2351 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ROS1P08922 2347 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ZNF716A6NP11 495 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 ZNF814B7Z6K7 855 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 AHSA1O95433 338 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 CNOT4O95628 575 aaKnown RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 THBDP07204 575 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 IMPDH2P12268 514 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 GTF2E2P29084 291 aaKnown RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 SLC16A1P53985 500 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 NR1H2P55055 460 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 RGS8P57771 180 aaPredicted RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 MTPNP58546 118 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 H3F3AP84243 136 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 HOXC5Q00444 222 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 RBBP4Q09028 425 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 CAPRIN1Q14444 709 aaKnown RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 TESK1Q15569 626 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 TSC22D1Q15714 1073 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 OTUD3Q5T2D3 398 aaPredicted RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 C1orf140Q5VVS0 124 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 FBXW9Q5XUX1 488 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 TMEM225Q6GV28 225 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 DHRS4L2Q6PKH6 230 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 SPNS3Q6ZMD2 512 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 C22orf34Q6ZV56 151 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 RETREG3Q86VR2 466 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 SLC30A8Q8IWU4 369 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 OR52E4Q8NGH9 312 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 SLC26A7Q8TE54 656 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 DNAJA4Q8WW22 397 aaPredicted RBP9.93□□□□□ -0.82
RFFL-204ENST00000414419 C3orf49Q96BT1 292 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 MUCL1Q96DR8 90 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 TRIM2Q9C040 744 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 UBTD1Q9HAC8 227 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 TMEM27Q9HBJ8 222 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 UPB1Q9UBR1 384 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 SLC9A8Q9Y2E8 581 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 ARID1AO14497 2285 aa9.93□□□□□ -0.82
RFFL-204ENST00000414419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 CIB4A0PJX0 185 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 LIPT2A6NK58 231 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 CCT8L1PA6NM43 557 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 BBIP1A8MTZ0 92 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 SIAH2O43255 324 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 LYZL6O75951 148 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 AKR7A3O95154 331 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ATE1O95260 518 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 IGHV3-9P01782 118 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 MDH1P40925 334 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 KLF10Q13118 480 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 STK11Q15831 433 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ADRM1Q16186 407 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 DEFB113Q30KQ7 82 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 TRMT5Q32P41 509 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 INTS11Q5TA45 600 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 CASP12Q6UXS9 341 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ATG4DQ86TL0 474 aaPredicted RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 GPAT4Q86UL3 456 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 RANBP3LQ86VV4 465 aaPredicted RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 TMEM99Q8N816 258 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 PCYOX1LQ8NBM8 494 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 OR10A6Q8NH74 314 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 STK35Q8TDR2 534 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 SLC25A36Q96CQ1 311 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 MBD6Q96DN6 1003 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 PLPPR2Q96GM1 343 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ALPK1Q96QP1 1244 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ECSITQ9BQ95 431 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 SF3B5Q9BWJ5 86 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 CCDC134Q9H6E4 229 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ESRP2Q9H6T0 727 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 EVA1AQ9H8M9 152 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 C12orf10Q9HB07 376 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 SAR1AQ9NR31 198 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 ASB6Q9NWX5 421 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 KLHL14Q9P2G3 628 aa9.92□□□□□ -0.82
RFFL-204ENST00000414419 TESQ9UGI8 421 aaKnown RBP9.92□□□□□ -0.82
RFFL-204ENST00000414419 MAP1AP78559 2803 aaPredicted RBP9.91□□□□□ -0.82
RFFL-204ENST00000414419 LOC100653049A0A140TA62 436 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 A0A1W2PPR1 153 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 AQP7P3A6NL99 342 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 M0QX08 132 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 MRASO14807 208 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 KLF4O43474 513 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 OR2T1O43869 369 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 TPST1O60507 370 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 RAMP1O60894 148 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 KRT34O76011 436 aa9.91□□□□□ -0.82
RFFL-204ENST00000414419 VAMP5O95183 116 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms