RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ZNF687Q8N1G0 1237 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 POMGNT2Q8NAT1 580 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 ADAMTS14Q8WXS8 1223 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 RANBP3Q9H6Z4 567 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-208ENST00000413473 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 SPATA2Q9UM82 520 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 COPS3Q9UNS2 423 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 DTX4Q9Y2E6 619 aa13.75□□□□□ -0.21
TTC39A-208ENST00000413473 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 A0A0J9YY10 115 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 EGFP01133 1207 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 ANXA3P12429 323 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 HNRNPA2B1P22626 353 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 RAB38P57729 211 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 DEFB110Q30KQ9 67 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 NDUFAF6Q330K2 333 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 HSD17B12Q53GQ0 312 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MANEAQ5SRI9 462 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 OR51Q1Q8NH59 317 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 LGALS14Q8TCE9 139 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 SGTBQ96EQ0 304 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 DERL3Q96Q80 235 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MRPL39Q9NYK5 338 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 COPZ2Q9P299 210 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MPDZO75970 2070 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 ATG2AQ2TAZ0 1938 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 TNFRSF10CO14798 259 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 LINC01565O15544 149 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 SELENOFO60613 162 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 GATBO75879 557 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 WNT1P04628 370 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 H2AFB2P0C5Z0 115 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 DIO1P49895 249 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 ILF3Q12906 894 aaKnown RBP eCLIP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 GSG1Q2KHT4 349 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 FBXO46Q6PJ61 603 aaPredicted RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 KIAA1324Q6UXG2 1013 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 OVCH1Q7RTY7 1134 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 OR14A16Q8NHC5 309 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 LMF2Q9BU23 707 aaKnown RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 AUNIPQ9H7T9 357 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 EVA1AQ9H8M9 152 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 BEX1Q9HBH7 125 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 MKKSQ9NPJ1 570 aaPredicted RBP13.74□□□□□ -0.21
TTC39A-208ENST00000413473 DZANK1Q9NVP4 752 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 CACNA1CQ13936 2221 aa13.74□□□□□ -0.21
TTC39A-208ENST00000413473 IDSB3KWA1 339 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 PSMD9O00233 223 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 NOS1APO75052 506 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 ADRB1P08588 477 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 MAGEB1P43366 347 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 GGTLC2Q14390 218 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 NNATQ16517 81 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 ST3GAL2Q16842 350 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 ZBTB37Q5TC79 503 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 SLITRK4Q8IW52 837 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 CMTM4Q8IZR5 234 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 NPEPL1Q8NDH3 523 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 RCBTB1Q8NDN9 531 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 OR6K6Q8NGW6 343 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 MRGPRX1Q96LB2 322 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 TCEAL2Q9H3H9 227 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 NOX4Q9NPH5 578 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 WSB2Q9NYS7 404 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 MRPL15Q9P015 296 aaKnown RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 OR6C68A6NDL8 312 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 IFI6P09912 130 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 SRMP19623 302 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 LGALS3BPQ08380 585 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 KLF9Q13886 244 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 ZNF550Q7Z398 422 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 FRMD1Q8N878 549 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 RIT1Q92963 219 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 RBM18Q96H35 190 aaKnown RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 HSPA12BQ96MM6 686 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 GPR137Q96N19 417 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 LMAN2LQ9H0V9 348 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 C2orf42Q9NWW7 574 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 NKIRAS2Q9NYR9 191 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 SCML1Q9UN30 329 aa13.73□□□□□ -0.21
TTC39A-208ENST00000413473 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
TTC39A-208ENST00000413473 PIN1P1O15428 100 aa13.72□□□□□ -0.21
TTC39A-208ENST00000413473 CDC123O75794 336 aaPredicted RBP13.72□□□□□ -0.21
TTC39A-208ENST00000413473 GDNFP39905 211 aa13.72□□□□□ -0.21
TTC39A-208ENST00000413473 FGFBP1Q14512 234 aa13.72□□□□□ -0.21
TTC39A-208ENST00000413473 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
TTC39A-208ENST00000413473 HES5Q5TA89 166 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms