RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 BCAS4Q8TDM0 211 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 STK35Q8TDR2 534 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 DNAJA4Q8WW22 397 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-210ENST00000412342 MCHR1Q99705 422 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 CELSR2Q9HCU4 2923 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 CD300AQ9UGN4 299 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 BAG5Q9UL15 447 aa11.73□□□□□ -0.53
HDAC8-210ENST00000412342 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 CENPEQ02224 2701 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 IGKV3D-15A0A087WSY6 115 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 A0A087WUJ7 227 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 PRKD3O94806 890 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 PNMTP11086 282 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 HSD17B1P14061 328 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 IDUAP35475 653 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 PCYT1AP49585 367 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 P2RY4P51582 365 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SLC16A1P53985 500 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 CDH12P55289 794 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 NCALDP61601 193 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SELENOWP63302 87 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SLC35A1P78382 337 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 PDK3Q15120 406 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 ENTPD8Q5MY95 495 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 C1orf140Q5VVS0 124 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 WDR88Q6ZMY6 472 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 MEX3BQ6ZN04 569 aaKnown RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 CBLL1Q75N03 491 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 NUFIP2Q7Z417 695 aaKnown RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 LUZP2Q86TE4 346 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 CARM1Q86X55 608 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 TUSC5Q8IXB3 177 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 FAM156AQ8NDB6 213 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SLC47A1Q96FL8 570 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 NSL1Q96IY1 281 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 KCTD14Q9BQ13 255 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 OPN3Q9H1Y3 402 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-210ENST00000412342 TMEM27Q9HBJ8 222 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 GALNT8Q9NY28 637 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 KLHL9Q9P2J3 617 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 RPS6KB2Q9UBS0 482 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 SH3GLB1Q9Y371 365 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
HDAC8-210ENST00000412342 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 CPSF4LA6NMK7 179 aaKnown RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 CHP2O43745 196 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 IFNA14P01570 189 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 NCK1P16333 377 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 FPR1P21462 350 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 EDNRAP25101 427 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 OR2B6P58173 313 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 RASGEF1BQ0VAM2 473 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 CEACAM7Q14002 265 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 GTF2IRD2BQ6EKJ0 949 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 PAQR6Q6TCH4 344 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 GTF2IRD2Q86UP8 949 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 CCDC103Q8IW40 242 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF610Q8N9Z0 462 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 RBM15BQ8NDT2 890 aaKnown RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ADAMTS16Q8TE57 1224 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 PROX1Q92786 737 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 KTI12Q96EK9 354 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 PRSS27Q9BQR3 290 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 ADA2Q9NZK5 511 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 EGFL7Q9UHF1 273 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 FOXD3Q9UJU5 478 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-210ENST00000412342 PROCRQ9UNN8 238 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
HDAC8-210ENST00000412342 FBN2P35556 2912 aa11.71□□□□□ -0.54
HDAC8-210ENST00000412342 TRAPPC13A5PLN9 417 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 HNRNPRO43390 633 aaKnown RBP11.7□□□□□ -0.54
HDAC8-210ENST00000412342 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
HDAC8-210ENST00000412342 SMNDC1O75940 238 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC8-210ENST00000412342 AHSA1O95433 338 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 GPIP06744 558 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 YES1P07947 543 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 PRF1P14222 555 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 CALB2P22676 271 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 UQCRC1P31930 480 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 CCKARP32238 428 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 NTF4P34130 210 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 OR1E2P47887 323 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 CTBP2P56545 445 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 SORDQ00796 357 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 LTBQ06643 244 aa11.7□□□□□ -0.54
HDAC8-210ENST00000412342 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms