RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 MED13LQ71F56 2210 aa16.84■□□□□ 0.29
SF3A1-202ENST00000411423 MAP1AP78559 2803 aaPredicted RBP16.83■□□□□ 0.29
SF3A1-202ENST00000411423 C5orf58C9J3I9 102 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 AKR7A3O95154 331 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 UQCRBP14927 111 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 PPIBP23284 216 aaKnown RBP16.83■□□□□ 0.28
SF3A1-202ENST00000411423 IL32P24001 234 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 CXCR1P25024 350 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 AQP1P29972 269 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 PRKAR1BP31321 381 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 IDUAP35475 653 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 ADAM8P78325 824 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 SLC35A1P78382 337 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 EGR4Q05215 589 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 SLC17A1Q14916 467 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 P2RY6Q15077 328 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 OR7A5Q15622 319 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 ACKR1Q16570 336 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 DHRS4L2Q6PKH6 230 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 TGIF2LYQ8IUE0 185 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 ZIC4Q8N9L1 334 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 LILRB1Q8NHL6 650 aaPredicted RBP16.83■□□□□ 0.28
SF3A1-202ENST00000411423 CGREF1Q99674 301 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 HDHD5Q9BXW7 423 aa16.83■□□□□ 0.28
SF3A1-202ENST00000411423 TPST2O60704 377 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 GUCY1A3Q02108 690 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 DMTNQ08495 405 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 FOXD4Q12950 439 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-202ENST00000411423 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
SF3A1-202ENST00000411423 ZSWIM7Q19AV6 140 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 OTUD3Q5T2D3 398 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-202ENST00000411423 PAQR6Q6TCH4 344 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 ZNF704Q6ZNC4 412 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-202ENST00000411423 ZNF100Q8IYN0 542 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 ZNF433Q8N7K0 673 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-202ENST00000411423 WFDC11Q8NEX6 87 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 OR52E4Q8NGH9 312 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 IGFBPL1Q8WX77 278 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 SIKE1Q9BRV8 207 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 PTDSS2Q9BVG9 487 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 FANCFQ9NPI8 374 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 EMC3Q9P0I2 261 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 TRIM33Q9UPN9 1127 aa16.82■□□□□ 0.28
SF3A1-202ENST00000411423 A8MVM7 634 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 HOXC12P31275 282 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 GZMMP51124 257 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 MAP2K6P52564 334 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 PCBP3P57721 371 aaKnown RBP16.81■□□□□ 0.28
SF3A1-202ENST00000411423 COPZ1P61923 177 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 C1orf140Q5VVS0 124 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 METTL21CQ5VZV1 264 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 FBXW9Q5XUX1 488 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 NEUROG1Q92886 237 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 SLC35B4Q969S0 331 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 APH1AQ96BI3 265 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 KTI12Q96EK9 354 aaPredicted RBP16.81■□□□□ 0.28
SF3A1-202ENST00000411423 ZNF385AQ96PM9 386 aaKnown RBP16.81■□□□□ 0.28
SF3A1-202ENST00000411423 NPAP1Q9NZP6 1156 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 SEC14L4Q9UDX3 406 aa16.81■□□□□ 0.28
SF3A1-202ENST00000411423 IGKV1D-42A0A075B6H8 117 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 A0A1B0GWA3 101 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 DPRXA6NFQ7 191 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 AQP7P3A6NL99 342 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 EVPLLA8MZ36 301 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 FTCDNL1E5RQL4 147 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 PDLIM1O00151 329 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 ANGPT2O15123 496 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 EIF1BO60739 113 aaKnown RBP16.8■□□□□ 0.28
SF3A1-202ENST00000411423 MFN2O95140 757 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 GPIP06744 558 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 ITGA5P08648 1049 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 NFYCQ13952 458 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 STK11Q15831 433 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 NCMAPQ5T1S8 102 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 C6orf89Q6UWU4 347 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 CASP12Q6UXS9 341 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 NET1Q7Z628 596 aaPredicted RBP16.8■□□□□ 0.28
SF3A1-202ENST00000411423 GPR32P1Q8NGA4 272 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 HSD17B8Q92506 261 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 NAA11Q9BSU3 229 aaPredicted RBP16.8■□□□□ 0.28
SF3A1-202ENST00000411423 SLC7A10Q9NS82 523 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 BEX4Q9NWD9 120 aaPredicted RBP16.8■□□□□ 0.28
SF3A1-202ENST00000411423 ADPRHL2Q9NX46 363 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 EDARQ9UNE0 448 aa16.8■□□□□ 0.28
SF3A1-202ENST00000411423 FXYD1O00168 92 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 GPR171O14626 319 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 MRPL33O75394 65 aaKnown RBP16.79■□□□□ 0.28
SF3A1-202ENST00000411423 RAD51DO75771 328 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 CNOT4O95628 575 aaKnown RBP16.79■□□□□ 0.28
SF3A1-202ENST00000411423 OPN1SWP03999 348 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 SLC6A2P23975 617 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 ARFIP2P53365 341 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 CRYBA2P53672 197 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 FAPQ12884 760 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 TSPO2Q5TGU0 170 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 P3H2Q8IVL5 708 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 UBE2J2Q8N2K1 259 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 LSMEM1Q8N8F7 131 aa16.79■□□□□ 0.28
SF3A1-202ENST00000411423 SMYD1Q8NB12 490 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms