RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 PIN1P1O15428 100 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 DNAJA2O60884 412 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 RP2O75695 350 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 KRT33AO76009 404 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 NCR1O76036 304 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 SUPT7LO94864 414 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 KNG1P01042 644 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 HMGN2P05204 90 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 GSNP06396 782 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 GATA3P23771 443 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ALDH3B1P43353 468 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 SLC17A1Q14916 467 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 UAP1Q16222 522 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF385BQ569K4 471 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 OTUD3Q5T2D3 398 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 AVPI1Q5T686 147 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 GSPT2Q8IYD1 628 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 BCL2L2Q92843 193 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 TMEM45BQ96B21 275 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 TMIGD2Q96BF3 282 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 FAM120BQ96EK7 910 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 AURKBQ96GD4 344 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 EGLN2Q96KS0 407 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ALKBH3Q96Q83 286 aaPredicted RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 KCNA7Q96RP8 456 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 GPA33Q99795 319 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 CCDC106Q9BWC9 280 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 NELFAQ9H3P2 528 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 NOX3Q9HBY0 568 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 MOV10Q9HCE1 1003 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ZCCHC3Q9NUD5 404 aaKnown RBP9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ACER3Q9NUN7 267 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 TIMM22Q9Y584 194 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 MMP24Q9Y5R2 645 aa9.04□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 LCE2BO14633 110 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 TIMM23O14925 209 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 EIF1BO60739 113 aaKnown RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 UBTFL6P0CB48 400 aaPredicted RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 PCGF2P35227 344 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 EVX1P49640 407 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MRPS11P82912 194 aaKnown RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MVKQ03426 396 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 NPRL3Q12980 569 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 CALCOCO2Q13137 446 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MSMPQ1L6U9 139 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 ARMCX4Q5H9R4 360 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 SAXO2Q658L1 398 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 NOXRED1Q6NXP6 359 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 SPATC1Q76KD6 591 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 RHOUQ7L0Q8 258 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 LSRQ86X29 649 aaPredicted RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 FAM76AQ8TAV0 307 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF385AQ96PM9 386 aaKnown RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF317Q96PQ6 595 aaPredicted RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 CITED1Q99966 193 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MRPL57Q9BQC6 102 aaKnown RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 SYT3Q9BQG1 590 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 NAA11Q9BSU3 229 aaPredicted RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 LAT2Q9GZY6 243 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MRPL46Q9H2W6 279 aaKnown RBP9.03□□□□□ -0.96
CCDC148-203ENST00000409889 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 ZNF69Q9UC07 566 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 MID2Q9UJV3 735 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 PPP2R2CQ9Y2T4 447 aa9.03□□□□□ -0.96
CCDC148-203ENST00000409889 EPPK1P58107 5090 aaKnown RBP9.02□□□□□ -0.96
CCDC148-203ENST00000409889 TENM3Q9P273 2699 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 CCDC151A5D8V7 595 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 CLDN34H7C241 214 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 ANKRD28O15084 1053 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SCAMP2O15127 329 aaKnown RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 CSTAP01040 98 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 IGHV2-5P01817 119 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 ENO1P06733 434 aaKnown RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SBK3P0C264 359 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 EFNA1P20827 205 aaPredicted RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 RBMXP38159 391 aaKnown RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 FRKP42685 505 aaPredicted RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 CLK1P49759 484 aaKnown RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SEC24CP53992 1094 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SLC35A1P78382 337 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 MAD2L1BPQ15013 274 aaPredicted RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SLC9A3R2Q15599 337 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 ATP6AP1LQ52LC2 224 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 UNC50Q53HI1 259 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 ZNF678Q5SXM1 525 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 LINGO2Q7L985 606 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
CCDC148-203ENST00000409889 SLC35F6Q8N357 371 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 KIR3DL3Q8N743 410 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 ZIC4Q8N9L1 334 aa9.02□□□□□ -0.97
CCDC148-203ENST00000409889 OR9K2Q8NGE7 335 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms