RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OR52N5Q8NH56 324 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 MAPK15Q8TD08 544 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 MRGPRDQ8TDS7 321 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 LMX1AQ8TE12 382 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SLC37A2Q8TED4 501 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SAP25Q8TEE9 199 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SETD7Q8WTS6 366 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 ZFAND2BQ8WV99 257 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 C10orf82Q8WW14 230 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SMPDL3AQ92484 453 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 NEIL2Q969S2 332 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 PYCR2Q96C36 320 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CCT8L2Q96SF2 557 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 PYGO2Q9BRQ0 406 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SIKE1Q9BRV8 207 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CCDC106Q9BWC9 280 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 RAB11FIP5Q9BXF6 653 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 ILKAPQ9H0C8 392 aaPredicted RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 PCBD2Q9H0N5 130 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TUBB1Q9H4B7 451 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 EHD1Q9H4M9 534 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 EML4Q9HC35 981 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 Q9N2K0 584 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 MID1IP1Q9NPA3 183 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CCDC177Q9NQR7 707 aaPredicted RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 DNAJC11Q9NVH1 559 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 ATAD3AQ9NVI7 634 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 NLGN3Q9NZ94 848 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OR6C2Q9NZP2 312 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OPTCQ9UBM4 332 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 LNPEPQ9UIQ6 1025 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SLC22A14Q9Y267 594 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 STK38LQ9Y2H1 464 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TDRKHQ9Y2W6 561 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 DNAJC15Q9Y5T4 150 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 USH1CQ9Y6N9 552 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 COLEC10Q9Y6Z7 277 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 R4GN57 208 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 U3KQA8 63 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 FER1L5A0AVI2 2057 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 NUP214P35658 2090 aaPredicted RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 EP300Q09472 2414 aaPredicted RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 FAM186AA6NE01 2351 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 IGKV1-8A0A0C4DH67 115 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 E7EQ34 232 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 H0YIV9 168 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SDHDO14521 159 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 AZIN1O14977 448 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 OR4F21O95013 312 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CLDN9O95484 217 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RAF1P04049 648 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 GPIP06744 558 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CAPN1P07384 714 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RETP07949 1114 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RAB40ALP0C0E4 278 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 ZNF806P0C7X5 589 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 NEFHP12036 1026 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 PSMB5P28074 263 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 NBL1P41271 181 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 BMXP51813 675 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CCNG1P51959 295 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 LIMK1P53667 647 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 REEP5Q00765 189 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RELAQ04206 551 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 GABPB1Q06547 395 aaPredicted RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 PRDX1Q06830 199 aaKnown RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 CHIT1Q13231 466 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 XKR7Q5GH72 579 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CFAP157Q5JU67 520 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 TCHHL1Q5QJ38 904 aaPredicted RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 ADAMTSL4-AS1Q5T5F5 129 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 LIPJQ5W064 366 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CLEC6AQ6EIG7 209 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 TCEAL6Q6IPX3 200 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 EPGNQ6UW88 154 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 C16orf54Q6UWD8 224 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SUSD1Q6UWL2 747 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 GPRIN3Q6ZVF9 776 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SPATA21Q7Z572 469 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 AMIGO1Q86WK6 493 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CLYBLQ8N0X4 340 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 ZNF843Q8N446 348 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 ARL10Q8N8L6 244 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 POGLUT1Q8NBL1 392 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 OR2L3Q8NG85 312 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 OR4K1Q8NGD4 311 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 OR2T11Q8NH01 316 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 OR4C6Q8NH72 309 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 TWIST2Q8WVJ9 160 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SLC5A11Q8WWX8 675 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 LCN9Q8WX39 176 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 TCEAL3Q969E4 200 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CXorf40BQ96DE9 158 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 MED8Q96G25 268 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SFXN2Q96NB2 322 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 KCNA7Q96RP8 456 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 EBF4Q9BQW3 602 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 TBC1D10AQ9BXI6 508 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 NUSAP1Q9BXS6 441 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms