RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MAFAQ8NHW3 353 aaPredicted RBP18.37■□□□□ 0.53
USP39-204ENST00000409766 SMAP2Q8WU79 429 aaPredicted RBP18.37■□□□□ 0.53
USP39-204ENST00000409766 GPX7Q96SL4 187 aaPredicted RBP18.37■□□□□ 0.53
USP39-204ENST00000409766 PILRBQ9UKJ0 227 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 A0A1W2PQL4 384 aaPredicted RBP18.37■□□□□ 0.53
USP39-204ENST00000409766 SMIM30A4D0T7 59 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ACTC1P68032 377 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ACTA1P68133 377 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ZNF117Q03924 483 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 EGR4Q05215 589 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 SLC29A4Q7RTT9 530 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 GPALPP1Q8IXQ4 340 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 NPEPL1Q8NDH3 523 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 OR5W2Q8NH69 310 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 DDOQ99489 341 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 MIXL1Q9H2W2 232 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ABCB9Q9NP78 766 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 MUTYHQ9UIF7 546 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 A0A1W2PQM1 296 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 SHISA3A0PJX4 238 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 CD8B2A6NJW9 211 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 OR6C76A6NM76 312 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 CASKO14936 926 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 ANKRD34CP0C6C1 535 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 CD8BP10966 210 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 GRK6P43250 576 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 SHISA6Q6ZSJ9 500 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 RABEPKQ7Z6M1 372 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 SLC38A9Q8NBW4 561 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 MOSPD2Q8NHP6 518 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 NEIL3Q8TAT5 605 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 STT3BQ8TCJ2 826 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 MOGAT1Q96PD6 335 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 NEURL2Q9BR09 285 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 ADAM19Q9H013 955 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 MMP25Q9NPA2 562 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 FSCN3Q9NQT6 498 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 HIF3AQ9Y2N7 669 aa18.36■□□□□ 0.53
USP39-204ENST00000409766 ASCC3Q8N3C0 2202 aaKnown RBP18.35■□□□□ 0.53
USP39-204ENST00000409766 A0A1W2PQD3 144 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 E9PI62 339 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 SIGLEC6O43699 453 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 IDH3BO43837 385 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ABCD3P28288 659 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 SLC6A8P48029 635 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 CAV3P56539 151 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 FOXL2P58012 376 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ACY1Q03154 408 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 PLCXD2Q0VAA5 305 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 GGTLC2Q14390 218 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ZNF79Q15937 498 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 AGAP7PQ5VUJ5 663 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ZNF563Q8TA94 476 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 AP3S1Q92572 193 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ZMYND19Q96E35 227 aaPredicted RBP18.35■□□□□ 0.53
USP39-204ENST00000409766 OMA1Q96E52 524 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 C4orf36Q96KX1 117 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 NMNAT3Q96T66 252 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 C12orf10Q9HB07 376 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 CPNE5Q9HCH3 593 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ZNF229Q9UJW7 825 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 IGLV3-12A0A075B6K2 115 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ALG1L2C9J202 215 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 PLPP2O43688 288 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 RGS9O75916 674 aaPredicted RBP18.35■□□□□ 0.53
USP39-204ENST00000409766 PTTG1O95997 202 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 TACR3P29371 465 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 ERVK-25P63136 954 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 CCL7P80098 99 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 HLA-BQ31612 363 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 VASH1Q7L8A9 365 aaPredicted RBP18.35■□□□□ 0.53
USP39-204ENST00000409766 SSX6Q7RTT6 188 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 MARCH3Q86UD3 253 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 WDR5BQ86VZ2 330 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 C17orf47Q8NEP4 570 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 NMNAT2Q9BZQ4 307 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 SLC7A5P2Q9GIP4 190 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 NANSQ9NR45 359 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 KLHL1Q9NR64 748 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 SUSD2Q9UGT4 822 aa18.35■□□□□ 0.53
USP39-204ENST00000409766 OR6C68A6NDL8 312 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 DVL2O14641 736 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 HCRTR2O43614 444 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 TFP02787 698 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 ASAH2BP0C7U1 165 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 TDGF1P13385 188 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 CD53P19397 219 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 PNLIPRP2P54317 469 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 OR12D2P58182 307 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 LTBQ06643 244 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 POMGNT2Q8NAT1 580 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 OR4D9Q8NGE8 314 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 OR51L1Q8NGJ5 315 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 RASD2Q96D21 266 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 OR6C1Q96RD1 312 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 C14orf119Q9NWQ9 140 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 NOX1Q9Y5S8 564 aa18.34■□□□□ 0.53
USP39-204ENST00000409766 C17orf51A8MQB3 221 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 BLOC1S5-TXNDC5H3BN57 136 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms