RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
LIMS2-206ENST00000409754 TAPBPLQ9BX59 468 aa12.82□□□□□ -0.36
LIMS2-206ENST00000409754 DEFB126Q9BYW3 111 aa12.82□□□□□ -0.36
LIMS2-206ENST00000409754 TIMMDC1Q9NPL8 285 aa12.82□□□□□ -0.36
LIMS2-206ENST00000409754 EXOGQ9Y2C4 368 aaKnown RBP12.82□□□□□ -0.36
LIMS2-206ENST00000409754 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
LIMS2-206ENST00000409754 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
LIMS2-206ENST00000409754 TEX51A0A1B0GUA7 166 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 MYL12BO14950 172 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 STK17BO94768 372 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 PPP1R3DO95685 299 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 IFNGP01579 166 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 IGHEP01854 428 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 HSMCR30P0CW71 290 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 GP1BBP13224 206 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-206ENST00000409754 MYL12AP19105 171 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 FOLR3P41439 243 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 PRPS1P60891 318 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
LIMS2-206ENST00000409754 EGR4Q05215 589 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 EIF3IQ13347 325 aaKnown RBP12.81□□□□□ -0.36
LIMS2-206ENST00000409754 TMED1Q13445 227 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 SPHARQ15513 63 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 EXT1Q16394 746 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 ZNF74Q16587 644 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 ANKDD1AQ495B1 522 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 ARMC4Q5T2S8 1044 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 FAM69BQ5VUD6 431 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 PLBD1Q6P4A8 553 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 LYPD8Q6UX82 237 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 DPY19L2P2Q6ZN68 376 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 SLC15A4Q8N697 577 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 LRRC17Q8N6Y2 441 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 BBS1Q8NFJ9 593 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 GPR119Q8TDV5 335 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 IMMP1LQ96LU5 166 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 GPX7Q96SL4 187 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-206ENST00000409754 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 CHCHD3Q9NX63 227 aaKnown RBP12.81□□□□□ -0.36
LIMS2-206ENST00000409754 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 OSGIN1Q9UJX0 560 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 MGAQ8IWI9 3026 aa12.81□□□□□ -0.36
LIMS2-206ENST00000409754 A0A1W2PQ72 361 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 C17orf51A8MQB3 221 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 PRR23D1E9PI22 279 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 SOCS6O14544 535 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 TNFSF15O95150 251 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 NUDT14O95848 222 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 SCG5P05408 212 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 FBXO45P0C2W1 286 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 PRR23D2P0DMB1 279 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 COX6A1P12074 109 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ZNF3P17036 446 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 CXCR1P25024 350 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 POLR2HP52434 150 aaKnown RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 SUMO3P55854 103 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 C17orf67Q0P5P2 114 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 C1DQ13901 141 aaKnown RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 QPRTQ15274 297 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 BTBD16Q32M84 506 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ZNF362Q5T0B9 420 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 MEPCEQ7L2J0 689 aaKnown RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 OR5M3Q8NGP4 307 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 M1APQ8TC57 530 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 DUSP19Q8WTR2 217 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 OPALINQ96PE5 141 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 JAM3Q9BX67 310 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 MMP25Q9NPA2 562 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 KLHL21Q9UJP4 597 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 HS3ST3B1Q9Y662 390 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 EPG5Q9HCE0 2579 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 EXPH5Q8NEV8 1989 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 NBEAQ8NFP9 2946 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 TAF4O00268 1085 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 CCRL2O00421 344 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ARPC3O15145 178 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 IDH3BO43837 385 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 AIREO43918 545 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 DLGAP3O95886 979 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 NOS3P29474 1203 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ETV1P50549 477 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 MLLT11Q13015 90 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ITGADQ13349 1161 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 DYNC1I2Q13409 638 aaKnown RBP12.8□□□□□ -0.36
LIMS2-206ENST00000409754 COL28A1Q2UY09 1125 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 PAQR6Q6TCH4 344 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 GRINAQ7Z429 371 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
LIMS2-206ENST00000409754 ERMAPQ96PL5 475 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms