RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SLC35F5Q8WV83 523 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SELENOMQ8WWX9 145 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NELL1Q92832 810 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ELP4Q96EB1 424 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PIWIL1Q96J94 861 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 KATNB1Q9BVA0 655 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MRIQ9BWK5 157 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SPATC1LQ9H0A9 340 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 KLHL31Q9H511 634 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SEBOXQ9HB31 216 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 FZD3Q9NPG1 666 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SEMA4BQ9NPR2 832 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 B3GAT2Q9NPZ5 323 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TREM2Q9NZC2 230 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NUDT4Q9NZJ9 180 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MIOXQ9UGB7 285 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 BTNL2Q9UIR0 455 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 KCND3Q9UK17 655 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FBXL2Q9UKC9 423 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ERVK-19Q9WJR5 959 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 APC2O95996 2303 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 DNHD1Q96M86 4753 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CITO14578 2027 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 A0A1B0GUH1 482 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TRDV1A0A1B0GX56 115 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TMEM129A0AVI4 362 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PLSCR5A0PG75 271 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NAP1L6A6NFF2 107 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 C1orf196B1AJZ1 125 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 C19orf81C9J6K1 198 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 HAS3O00219 553 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FPGTO14772 594 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PPEF2O14830 753 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ENTPD6O75354 484 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NDUFS6O75380 124 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 STBD1O95210 358 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GADD45GO95257 159 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 HPP00738 406 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 JCHAINP01591 159 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 HLA-DPB1P04440 258 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 F7P08709 466 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 NPSP0C0P6 89 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 LINC00271P0C7V0 271 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 EBLN1P0CF75 366 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 HAPLN1P10915 354 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 PRPS2P11908 318 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MYCLP12524 364 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 GABRA1P14867 456 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 AHCYP23526 432 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ATP5A1P25705 553 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 HTR2AP28223 471 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 EPHA2P29317 976 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ADRA1AP35348 466 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ATP5C1P36542 298 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 MPLP40238 635 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MNDAP41218 407 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 RFX3P48380 749 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PITPNBP48739 271 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 RPL34P49207 117 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 P2RY4P51582 365 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CDKN2DP55273 166 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TAS2R60P59551 318 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 AP3S2P59780 193 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 VLDLRP98155 873 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 IL10RBQ08334 325 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ECH1Q13011 328 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CHAF1BQ13112 559 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TPBGQ13641 420 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CBFBQ13951 182 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OR4D1Q15615 310 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 DNLZQ5SXM8 178 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 C22orf42Q6IC83 251 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TCEAL6Q6IPX3 200 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TSSK4Q6SA08 328 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 IL27RAQ6UWB1 636 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GSG1LQ6UXU4 331 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 ABI3BPQ7Z7G0 1075 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GLCCI1Q86VQ1 547 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MSRB3Q8IXL7 192 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TOMM5Q8N4H5 51 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 GPR150Q8NGU9 434 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 OR1S1Q8NH92 325 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 METTL6Q8TCB7 284 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TCTEX1D2Q8WW35 142 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 HPDLQ96IR7 371 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 PFDN5Q99471 154 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 FEVQ99581 238 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 BARD1Q99728 777 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 GINS4Q9BRT9 223 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 INPP5KQ9BT40 448 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 THAP7Q9BT49 309 aaPredicted RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 CACNG6Q9BXT2 260 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 S1PR5Q9H228 398 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SLC38A1Q9H2H9 487 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SLC25A19Q9HC21 320 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 AMBNQ9NP70 447 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CYSLTR2Q9NS75 346 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 NRBP2Q9NSY0 501 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 RNF146Q9NTX7 359 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms