RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 ESPL1Q14674 2120 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 KIAA1549Q9HCM3 1950 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TRAV36DV7A0A075B6V5 113 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 IGHV3-15A0A0B4J1V0 119 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 SULT2B1O00204 365 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 CCL21O00585 134 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 LRRTM2O43300 516 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 PIP5K1CO60331 668 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 SYNGR4O95473 234 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TGM6O95932 706 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 H1F0P07305 194 aaKnown RBP13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 UMPSP11172 480 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 CBLP22681 906 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 PTGER4P35408 488 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 UGT2B15P54855 530 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TRAM2Q15035 370 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 OR7A5Q15622 319 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 PDSS1Q5T2R2 415 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 NSUN5P2Q63ZY6 315 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 B3GNT6Q6ZMB0 384 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 SEM1Q6ZVN7 128 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 FJX1Q86VR8 437 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 MARVELD2Q8N4S9 558 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 PFN4Q8NHR9 129 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TMEM239Q8WW34 195 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 ROBO4Q8WZ75 1007 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
SNRNP27-202ENST00000409116 HELZ2Q9BYK8 2649 aaKnown RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 LIPT2A6NK58 231 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 SLC22A20A6NK97 555 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 LRRN3E7EW58 273 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 E9PLN8 166 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 J3QKU1 62 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 FKBP6O75344 327 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 AQP8O94778 261 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 PMS2P2O95744 297 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 HOXD4P09016 255 aaPredicted RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 GLI4P10075 376 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 FPR1P21462 350 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 RRM2P31350 389 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 ZNF239Q16600 458 aaKnown RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 MEX3DQ86XN8 651 aaKnown RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 C10orf53Q8N6V4 93 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 SLC25A36Q96CQ1 311 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 DHRS1Q96LJ7 313 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 UCN2Q96RP3 112 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 DMRTA2Q96SC8 542 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 TTYH2Q9BSA4 534 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 DENND2DQ9H6A0 471 aaPredicted RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 CALHM2Q9HA72 323 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 MEPEQ9NQ76 525 aaPredicted RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 VNN3Q9NY84 501 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 MEMO1Q9Y316 297 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 ZNF175Q9Y473 711 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
SNRNP27-202ENST00000409116 MPDZO75970 2070 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 A0A087WUU8 490 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 A0A1W2PRQ8 180 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 CD8B2A6NJW9 211 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ENO4A6NNW6 628 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ZNF814B7Z6K7 855 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 SMAD9O15198 467 aaKnown RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 GADD45GO95257 159 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ENPP1P22413 925 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 NUP107P57740 925 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 RAC3P60763 192 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ACTR3P61158 418 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 PMPCAQ10713 525 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 DGCR6Q14129 220 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 SEC23BQ15437 767 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 C4orf17Q53FE4 359 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 PODNL1Q6PEZ8 512 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 TBPL2Q6SJ96 375 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 P4HA3Q7Z4N8 544 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 PAPD5Q8NDF8 572 aaKnown RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 SLC7A13Q8TCU3 470 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 ACOT11Q8WXI4 607 aaPredicted RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 MOGAT1Q96PD6 335 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 EPYCQ99645 322 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 TAPBPLQ9BX59 468 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 PRRG4Q9BZD6 226 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 C20orf141Q9NUB4 165 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
SNRNP27-202ENST00000409116 MED31Q9Y3C7 131 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms