RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ERN2Q76MJ5 926 aaKnown RBP16.46■□□□□ 0.23
SMPD4-202ENST00000409031 OR52A5Q9H2C5 316 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 FGF20Q9NP95 211 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-202ENST00000409031 PRTFDC1Q9NRG1 225 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 SLC22A11Q9NSA0 550 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 SLC45A1Q9Y2W3 748 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 TRAV20A0A0B4J274 112 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 MBLAC1A4D2B0 266 aaPredicted RBP16.46■□□□□ 0.22
SMPD4-202ENST00000409031 ASPDHA6ND91 283 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 UNCXA6NJT0 531 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 RPL34P49207 117 aaKnown RBP16.46■□□□□ 0.22
SMPD4-202ENST00000409031 PYCR3Q53H96 274 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 ACTBL2Q562R1 376 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 SERINC5Q86VE9 423 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 PTOV1Q86YD1 416 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 RELL2Q8NC24 303 aaPredicted RBP16.46■□□□□ 0.22
SMPD4-202ENST00000409031 DUSP18Q8NEJ0 188 aa16.46■□□□□ 0.22
SMPD4-202ENST00000409031 TESQ9UGI8 421 aaKnown RBP16.46■□□□□ 0.22
SMPD4-202ENST00000409031 NUP98P52948 1817 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 SMAD6O43541 496 aaKnown RBP16.45■□□□□ 0.22
SMPD4-202ENST00000409031 GALTP07902 379 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 IFITM3Q01628 133 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CCL14Q16627 93 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 ALKAL1Q6UXT8 129 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 NAA40Q86UY6 237 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 OR8D4Q8NGM9 314 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 OR13C2Q8NGS9 318 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HMGCLL1Q8TB92 370 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HRASLSQ9HDD0 168 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 A0A087WZY1 265 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM212A6NML5 194 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 PGCP20142 388 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 FOXK2Q01167 660 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CRMP1Q14194 572 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 FXNQ16595 210 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 C6orf132Q5T0Z8 1188 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 MRPL41Q8IXM3 137 aaKnown RBP16.45■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM106AQ96A25 262 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 TSPAN10Q9H1Z9 355 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-202ENST00000409031 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 B4GALT3O60512 393 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 RAD1O60671 282 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HLA-FP30511 346 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 FGF9P31371 208 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-202ENST00000409031 RAD52P43351 418 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 TNK1Q13470 666 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CDONQ4KMG0 1287 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HIST2H3PS2Q5TEC6 136 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HIST2H3AQ71DI3 136 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CDS1Q92903 461 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 ZDHHC12Q96GR4 267 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 MYADMQ96S97 322 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 ATF6BQ99941 703 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 P2RY12Q9H244 342 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CYSLTR2Q9NS75 346 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 GPATCH2Q9NW75 528 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 TAS2R5Q9NYW4 299 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 C1orf105O95561 183 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 HYAL2Q12891 473 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 CAMK2DQ13557 499 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 SULF2Q8IWU5 870 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 KDM8Q8N371 416 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 OR5AR1Q8NGP9 310 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 OR8D2Q9GZM6 311 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 C2orf42Q9NWW7 574 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 WNT6Q9Y6F9 365 aa16.45■□□□□ 0.22
SMPD4-202ENST00000409031 LINC00862A6NCI5 91 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 KLHDC8BQ8IXV7 354 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 OR51S1Q8NGJ8 323 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 H3BQ06 376 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-202ENST00000409031 DVL2O14641 736 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 EIF4EP06730 217 aaKnown RBP16.44■□□□□ 0.22
SMPD4-202ENST00000409031 CALCBP10092 127 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 RRASP10301 218 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 CRABP1P29762 137 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 TANGO2Q6ICL3 276 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 UQCC3Q6UW78 93 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 LAS2Q8IYD9 372 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 TOMM40LQ969M1 308 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 PGAM5Q96HS1 289 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 C19orf12Q9NSK7 152 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-202ENST00000409031 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 LRIT2A6NDA9 550 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 OR8G3PP0DMU2 310 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 SP3Q02447 781 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 EBPQ15125 230 aaKnown RBP16.44■□□□□ 0.22
SMPD4-202ENST00000409031 SLC9A3R2Q15599 337 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 NNATQ16517 81 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 OR2AK2Q8NG84 335 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 GLYATL2Q8WU03 294 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 SLAMF9Q96A28 289 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF337Q9Y3M9 751 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 MEIKINA0A087WXM9 373 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 SOD1P00441 154 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 IMPA1P29218 277 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 CD70P32970 193 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 BLKP51451 505 aa16.44■□□□□ 0.22
SMPD4-202ENST00000409031 FAM71E1Q6IPT2 247 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms