RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 XKR8Q9H6D3 395 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 OPA3Q9H6K4 179 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 MED17Q9NVC6 651 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 RCC2Q9P258 522 aaKnown RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 LHX3Q9UBR4 397 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 OR5H14A6NHG9 310 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 ACOT7O00154 380 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 MAGEB4O15481 346 aaPredicted RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 CD160O95971 181 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 NT5EP21589 574 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CDK2P24941 298 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 ITGA3P26006 1051 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 IFNGR2P38484 337 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 POU3F4P49335 361 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SPCS3P61009 180 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CXADRP78310 365 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 PCGF3Q3KNV8 242 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 MEPCEQ7L2J0 689 aaKnown RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 PIGXQ8TBF5 258 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SYNPRQ8TBG9 265 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SAMD8Q96LT4 415 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 GFI1Q99684 422 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SSX3Q99909 188 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 KLHL31Q9H511 634 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SEMA4GQ9NTN9 838 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 ANKRD10Q9NXR5 420 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CD2P06729 351 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 NR2F1P10589 423 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 TAS2R43P59537 309 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 RHOAP61586 193 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 PPP2CBP62714 309 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 PPP2CAP67775 309 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CAP1Q01518 475 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ELAVL1Q15717 326 aaKnown RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 NDUFAF6Q330K2 333 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 AGTRAPQ6RW13 159 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ZNF620Q6ZNG0 422 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 C16orf59Q7L2K0 433 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 GID4Q8IVV7 300 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 TTC9BQ8N6N2 239 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ZNF433Q8N7K0 673 aaPredicted RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 OR2T33Q8NG76 320 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 XAGE5Q8WWM1 108 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 MYLIPQ8WY64 445 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 FBXO32Q969P5 355 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CCDC86Q9H6F5 360 aaKnown RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 BRD9Q9H8M2 597 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ZDHHC3Q9NYG2 299 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 A0A1W2PR64 198 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ARL6IP5O75915 188 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 SLC25A27O95847 323 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 PRG2P13727 222 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 PAX6P26367 422 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 DPP4P27487 766 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CASRP41180 1078 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 NUBP1P53384 320 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 MANFP55145 182 aaKnown RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 ZNF85Q03923 595 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CNTN1Q12860 1018 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 TSTA3Q13630 321 aaPredicted RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 TAF13Q15543 124 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 OR7A5Q15622 319 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 RNF219Q5W0B1 726 aaPredicted RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 MED27Q6P2C8 311 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 FIGNL1Q6PIW4 674 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 UNQ6494/PRO21346Q6UXR6 183 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 PARGQ86W56 976 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 RNF113BQ8IZP6 322 aaKnown RBP11.8□□□□□ -0.52
HERC3-203ENST00000407637 STEAP2Q8NFT2 490 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 STOML3Q8TAV4 291 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 NEIL2Q969S2 332 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 APMAPQ9HDC9 416 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 POT1Q9NUX5 634 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 ST6GALNAC2Q9UJ37 374 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
HERC3-203ENST00000407637 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 AP4M1O00189 453 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 KCNAB3O43448 404 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 RHOP08100 348 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 NME1P15531 152 aaKnown RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 ADH6P28332 368 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TAS2R20P59543 309 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 POU4F2Q12837 409 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 RPL13AP3Q6NVV1 102 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms