RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ALG5Q9Y673 324 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 TRAV1-2A0A0B4J238 106 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 IGHV1OR15-9A0A0B4J2B8 117 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 ARPC3O15145 178 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 MAGEB4O15481 346 aaPredicted RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 WNT1P04628 370 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 PITPNBP48739 271 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 DIO1P49895 249 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 GFERP55789 205 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 RPS4XP62701 263 aaKnown RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 ISXQ2M1V0 245 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 SLC25A35Q3KQZ1 300 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 GXYLT1Q4G148 440 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 TCTE1Q5JU00 501 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 SLC35D3Q5M8T2 416 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 GATSQ8NAP1 163 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 NPEPL1Q8NDH3 523 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 FAM71CQ8NEG0 241 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 OR7G1Q8NGA0 311 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 SNX33Q8WV41 574 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 THAP4Q8WY91 577 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 RFT1Q96AA3 541 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 UPRTQ96BW1 309 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 MRPL48Q96GC5 212 aaKnown RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 CCNL2Q96S94 520 aaPredicted RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 NRIP3Q9NQ35 241 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 NPFFR2Q9Y5X5 522 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 TDRD6O60522 2096 aaKnown RBP15.41■□□□□ 0.06
NUP50-203ENST00000407019 ELOA3DA6NLF2 546 aaPredicted RBP15.41■□□□□ 0.06
NUP50-203ENST00000407019 C17orf105B2RV13 164 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 H0YIG0 161 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 ZNF217O75362 1048 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 TRIM3O75382 744 aaPredicted RBP15.41■□□□□ 0.06
NUP50-203ENST00000407019 PAHP00439 452 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 ALAS2P22557 587 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 ELOA3BQ3SY89 546 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 MED25Q71SY5 747 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 ZNF527Q8NB42 609 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 ELOA3Q8NG57 546 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 LMF1Q96S06 567 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 SPRTNQ9H040 489 aaPredicted RBP15.41■□□□□ 0.06
NUP50-203ENST00000407019 PDE7BQ9NP56 450 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 GNG8Q9UK08 70 aa15.41■□□□□ 0.06
NUP50-203ENST00000407019 IGKV1D-42A0A075B6H8 117 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 IGHV5-51A0A0C4DH38 117 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 TLCD2A6NGC4 264 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ORC5O43913 435 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 SLC43A1O75387 559 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ARL6IP5O75915 188 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 HPGDP15428 266 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 SPI1P17947 270 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CD1CP29017 333 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 PRPS1P60891 318 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ERVK-25P63136 954 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 SIRPAP78324 504 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CD83Q01151 205 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 COL19A1Q14993 1142 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 WBP2NLQ6ICG8 309 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 RPL22L1Q6P5R6 122 aaKnown RBP15.4■□□□□ 0.06
NUP50-203ENST00000407019 SLC7A5P1Q8MH63 180 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 GHDCQ8N2G8 530 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 DTX3Q8N9I9 347 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ZSCAN1Q8NBB4 408 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ZNRF4Q8WWF5 429 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 TRIM63Q969Q1 353 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 RASD2Q96D21 266 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 HSPA12BQ96MM6 686 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
NUP50-203ENST00000407019 GPX7Q96SL4 187 aaPredicted RBP15.4■□□□□ 0.06
NUP50-203ENST00000407019 DDOQ99489 341 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 GDF15Q99988 308 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 MARVELD1Q9BSK0 173 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 THAP7Q9BT49 309 aaPredicted RBP15.4■□□□□ 0.06
NUP50-203ENST00000407019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.4■□□□□ 0.069e-7■■■■□ 25.2
NUP50-203ENST00000407019 SLC2A4RGQ9NR83 387 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 UBQLN4Q9NRR5 601 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 NCDNQ9UBB6 729 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CACNA1IQ9P0X4 2223 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 OR6C68A6NDL8 312 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 SELENOFO60613 162 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CD1AP06126 327 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 YES1P07947 543 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 PNMTP11086 282 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 UBL4AP11441 157 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 EDNRAP25101 427 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CD38P28907 300 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 GRK6P43250 576 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 BIKQ13323 160 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 GRM7Q14831 915 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 CCDC85BQ15834 202 aaPredicted RBP15.4■□□□□ 0.06
NUP50-203ENST00000407019 FNDC7Q5VTL7 733 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 PYHIN1Q6K0P9 492 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 NOXA1Q86UR1 476 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 GPR135Q8IZ08 494 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 DEFB119Q8N690 84 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 OR6K6Q8NGW6 343 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 ZPLD1Q8TCW7 415 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 OIT3Q8WWZ8 545 aa15.4■□□□□ 0.06
NUP50-203ENST00000407019 RNF170Q96K19 258 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms