RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 RPS4Y1P22090 263 aaKnown RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 PAX7P23759 505 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 APOBEC3AP31941 199 aaPredicted RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 CHI3L1P36222 383 aaPredicted RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 ANXA11P50995 505 aaKnown RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 FOXG1P55316 489 aaPredicted RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 ABCE1P61221 599 aaKnown RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 LRRC74AQ0VAA2 488 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 GNA13Q14344 377 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 GPAT3Q53EU6 434 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 SPANXN4Q5MJ08 99 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 LRRC74BQ6ZQY2 392 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 TRIML2Q8N7C3 387 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 CNOT9Q92600 299 aaKnown RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 SF3B5Q9BWJ5 86 aaKnown RBP16.99■□□□□ 0.31
HDAC11-205ENST00000404548 SLC38A1Q9H2H9 487 aa16.99■□□□□ 0.31
HDAC11-205ENST00000404548 PHF1O43189 567 aaPredicted RBP16.98■□□□□ 0.31
HDAC11-205ENST00000404548 CPSF4O95639 269 aaKnown RBP16.98■□□□□ 0.31
HDAC11-205ENST00000404548 WNT11O96014 354 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 F12P00748 615 aaPredicted RBP16.98■□□□□ 0.31
HDAC11-205ENST00000404548 IMPDH2P12268 514 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 SLC25A3Q00325 362 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 GSTA3Q16772 222 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 TSPO2Q5TGU0 170 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 CYB5R2Q6BCY4 276 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 OGFOD2Q6N063 350 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 POMGNT2Q8NAT1 580 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 KCNK17Q96T54 332 aa16.98■□□□□ 0.31
HDAC11-205ENST00000404548 MTHFD2LQ9H903 347 aaPredicted RBP16.98■□□□□ 0.31
HDAC11-205ENST00000404548 SSU72Q9NP77 194 aaKnown RBP16.98■□□□□ 0.31
HDAC11-205ENST00000404548 TMEM72A0PK05 275 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 CFAP73A6NFT4 308 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 NDUFS8O00217 210 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 AP3D1O14617 1153 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 LBPP18428 481 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 USF1P22415 310 aaPredicted RBP16.97■□□□□ 0.31
HDAC11-205ENST00000404548 TACR3P29371 465 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 RPL14P50914 215 aaKnown RBP16.97■□□□□ 0.31
HDAC11-205ENST00000404548 PRPS1P60891 318 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 CHI3L2Q15782 390 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 SWI5Q1ZZU3 235 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 FAM174BQ3ZCQ3 159 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 ABHD12BQ7Z5M8 362 aaPredicted RBP16.97■□□□□ 0.31
HDAC11-205ENST00000404548 ZNF440Q8IYI8 595 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 PKNOX2Q96KN3 472 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 PPP1R36Q96LQ0 422 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 ZNF317Q96PQ6 595 aaPredicted RBP16.97■□□□□ 0.31
HDAC11-205ENST00000404548 BEX2Q9BXY8 128 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 ADAM19Q9H013 955 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 MANSC1Q9H8J5 431 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 ATP23Q9Y6H3 246 aa16.97■□□□□ 0.31
HDAC11-205ENST00000404548 GPIP06744 558 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 DBIP07108 87 aaKnown RBP16.96■□□□□ 0.31
HDAC11-205ENST00000404548 CHRM4P08173 479 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 IGHV4-31P0DP07 118 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 S100A3P33764 101 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 GZMKP49863 264 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 VSNL1P62760 191 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 EPS8Q12929 822 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 SYPL1Q16563 259 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 KLHL24Q6TFL4 600 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 RNF130Q86XS8 419 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 ANKFN1Q8N957 763 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 ZIC4Q8N9L1 334 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 AENQ8WTP8 325 aaKnown RBP16.96■□□□□ 0.31
HDAC11-205ENST00000404548 WDR60Q8WVS4 1066 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 NANOS1Q8WY41 292 aaKnown RBP16.96■□□□□ 0.31
HDAC11-205ENST00000404548 HTRA1Q92743 480 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 DNAJA3Q96EY1 480 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 SORT1Q99523 831 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 MEAF6Q9HAF1 191 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 MOV10Q9HCE1 1003 aaKnown RBP16.96■□□□□ 0.31
HDAC11-205ENST00000404548 MYOZ1Q9NP98 299 aaPredicted RBP16.96■□□□□ 0.31
HDAC11-205ENST00000404548 FKBP7Q9Y680 259 aa16.96■□□□□ 0.31
HDAC11-205ENST00000404548 YLPM1P49750 1951 aaKnown RBP16.95■□□□□ 0.3
HDAC11-205ENST00000404548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.95■□□□□ 0.32e-8■□□□□ 9.4
HDAC11-205ENST00000404548 OR6C65A6NJZ3 312 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 LIPT2A6NK58 231 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 AQP7P3A6NL99 342 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 VWC2LB2RUY7 222 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 ATP6V1G2-DDX39BF2Z307 99 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 TM9SF1O15321 606 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 IL7RP16871 459 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 CCNA2P20248 432 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 OTUD3Q5T2D3 398 aaPredicted RBP16.95■□□□□ 0.3
HDAC11-205ENST00000404548 MRPL2Q5T653 305 aaKnown RBP16.95■□□□□ 0.3
HDAC11-205ENST00000404548 HMGN2P46Q86SG4 172 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 OR9K2Q8NGE7 335 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 PANX1Q96RD7 426 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 C1QTNF6Q9BXI9 259 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 C20orf27Q9GZN8 174 aa16.95■□□□□ 0.3
HDAC11-205ENST00000404548 ARFGEF3Q5TH69 2177 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 ZC3H12DA2A288 527 aaKnown RBP16.94■□□□□ 0.3
HDAC11-205ENST00000404548 CDHR4A6H8M9 788 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 CCDC154A6NI56 674 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 PDE5AO76074 875 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 VAMP5O95183 116 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 SLC1A6P48664 564 aa16.94■□□□□ 0.3
HDAC11-205ENST00000404548 LSM11P83369 360 aaKnown RBP eCLIP16.94■□□□□ 0.3
HDAC11-205ENST00000404548 ZSWIM7Q19AV6 140 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms