RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 C11orf52Q96A22 123 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAM131CQ96AQ9 280 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PPP1R16AQ96I34 528 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CXorf58Q96LI9 332 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 C9orf72Q96LT7 481 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ATOH8Q96SQ7 321 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 APOL2Q9BQE5 337 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CCDC77Q9BR77 488 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TMEM109Q9BVC6 243 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ROPN1BQ9BZX4 212 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 EGLN1Q9GZT9 426 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CXXC4Q9H2H0 198 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 WDR41Q9HAD4 459 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ROPN1Q9HAT0 212 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 GPN1Q9HCN4 374 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PRSS16Q9NQE7 514 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TREX1Q9NSU2 369 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZCCHC3Q9NUD5 404 aaKnown RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 NINJ2Q9NZG7 142 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 MMP17Q9ULZ9 603 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CHMP2BQ9UQN3 213 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ERVK-19Q9WJR5 959 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TTC28Q96AY4 2481 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 TNRC6BQ9UPQ9 1833 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 TCRBV9S1A1TA0A576 114 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR5H15A6NDH6 313 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAM159BA6NKW6 160 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ARHGEF33A8MVX0 844 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 KPNA3O00505 521 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CSO75390 466 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CRLF1O75462 422 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 TBX6O95947 436 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 C1QAP02745 245 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 UGT2B4P06133 528 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 IVLP07476 585 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CTSLP07711 333 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GLRA1P23415 457 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 FCGR2BP31994 310 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 FCGR2CP31995 323 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ID1P41134 155 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPS9P46781 194 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 NUMBP49757 651 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 FHITP49789 147 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CCR4P51679 360 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF140P52738 457 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 KCNK10P57789 538 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GPX6P59796 221 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPS14P62263 151 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPS27AP62979 156 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 MFGE8Q08431 387 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ELP6Q0PNE2 266 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 POU6F1Q14863 301 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 HEPACAMQ14CZ8 416 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CDKN3Q16667 212 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 KCTD19Q17RG1 926 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 KLHL38Q2WGJ6 581 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 TTC31Q49AM3 519 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GLIPR1L2Q4G1C9 344 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 PDPK2PQ6A1A2 396 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CD164L2Q6UWJ8 174 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF730Q6ZMV8 503 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GPRIN3Q6ZVF9 776 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GLT6D1Q7Z4J2 308 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRRC6Q86X45 466 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CARM1Q86X55 608 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 FBXW8Q8N3Y1 598 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 RIBC1Q8N443 379 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR6K2Q8NGY2 324 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 PDCD6IPQ8WUM4 868 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CDKL2Q92772 493 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CLDN23Q96B33 292 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 MRPL53Q96EL3 112 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CERS2Q96G23 380 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CFAP36Q96G28 342 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 ALKBH3Q96Q83 286 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CYTH2Q99418 400 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 RBM4BQ9BQ04 359 aaKnown RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 DYRK4Q9NR20 520 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CHRAC1Q9NRG0 131 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 NLE1Q9NVX2 485 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 UBQLN2Q9UHD9 624 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 APPL1Q9UKG1 709 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAD1L1Q9Y6D9 718 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 SDK1Q7Z5N4 2213 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 CABIN1Q9Y6J0 2220 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRP4O75096 1905 aa4.03□□□□□ -1.76
HMGB3P19-201ENST00000403971 GOLGA4Q13439 2230 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 C1orf232A0A0U1RR37 186 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 EXOC1LA0A1B0GW35 172 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 LOC390937A0A1W2PQ73 354 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 C10orf142B7Z368 130 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 STX7O15400 261 aaKnown RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 CDH16O75309 829 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 BANF1O75531 89 aa4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 KLF8O95600 359 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P19-201ENST00000403971 IL1BP01584 269 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms