RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 GCH1P30793 250 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 POLR2HP52434 150 aaKnown RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 HSF5Q4G112 596 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 SLC37A2Q8TED4 501 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ELMOD3Q96FG2 381 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 SENP5Q96HI0 755 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ALG12Q9BV10 488 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 HS3ST3A1Q9Y663 406 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 GLI3P10071 1580 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 F5H5P2 479 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SYT5O00445 386 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 HLA-DMAP28067 261 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 FAM69AQ5T7M9 428 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 DLEU7Q6UYE1 221 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SPNS2Q8IVW8 549 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 IL17RDQ8NFM7 739 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ATOH1Q92858 354 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SNAPC3Q92966 411 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 OR51J1Q9H342 316 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ABRACLQ9P1F3 81 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SLC22A7Q9Y694 548 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 LOC102725191A0A1B0GVB3 256 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 LRIT2A6NDA9 550 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 TLCD2A6NGC4 264 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF593O00488 134 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 DVL2O14641 736 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GIFP27352 417 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 C9orf135Q5VTT2 229 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 LYSMD1Q96S90 227 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 NMNAT3Q96T66 252 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 VN1R3Q9BXE9 311 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 KLHL13Q9P2N7 655 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ADAM18Q9Y3Q7 739 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 LSM5Q9Y4Y9 91 aaKnown RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ASB1Q9Y576 335 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ACOD1A6NK06 481 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GFYI3L273 518 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 RPS25P62851 125 aaKnown RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GAB1Q13480 694 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 FCRLAQ7L513 359 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 NDUFAF7Q7L592 441 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GDF7Q7Z4P5 450 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SGPP2Q8IWX5 399 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 OR9K2Q8NGE7 335 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 ELSPBP1Q96BH3 223 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 SLC41A2Q96JW4 573 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 TBC1D29Q9UFV1 150 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 PIGBOS1A0A0B4J2F0 54 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 CTNSO60931 367 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 OR8U9P0C7N5 309 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GABRA5P31644 462 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 RELAQ04206 551 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 BCDIN3DQ7Z5W3 292 aaKnown RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-204ENST00000400337 GLYATL2Q8WU03 294 aa16.88■□□□□ 0.29
COL18A1-204ENST00000400337 LIPCP11150 499 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 TSFMP43897 325 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 LTBQ06643 244 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 RHOXF1Q8NHV9 184 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 FOXRED1Q96CU9 486 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 KNL1Q8NG31 2342 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 RACK1P63244 317 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 TGFBR3Q03167 851 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CRMP1Q14194 572 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CNN3Q15417 329 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 C3orf38Q5JPI3 329 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CMTM1Q8IZ96 169 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CNEP1R1Q8N9A8 125 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 HCAR1Q9BXC0 346 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 PRAF2O60831 178 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 PIGAP37287 484 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 LIM2P55344 173 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 KIAA1024LP59773 190 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CXADRP78310 365 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CYCSP99999 105 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 DCAF12Q5T6F0 453 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 FAM57BQ71RH2 274 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 TPRA1Q86W33 373 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 LRRC18Q8N456 261 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 G3V3Y1 287 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 GPRIN2O60269 458 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CAV2P51636 162 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 DUSP6Q16828 381 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 SLC46A1Q96NT5 459 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 EMC3Q9P0I2 261 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 BOKQ9UMX3 212 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 MEIOCA2RUB1 952 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 PSPHP78330 225 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 RBM39Q14498 530 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 EIF2S3LQ2VIR3 472 aaKnown RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 PYCR3Q53H96 274 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 CD163Q86VB7 1156 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF695Q8IW36 515 aa16.87■□□□□ 0.29
COL18A1-204ENST00000400337 C6orf106Q9H6K1 298 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-204ENST00000400337 MAKP20794 623 aa16.86■□□□□ 0.29
COL18A1-204ENST00000400337 SERPINA2P20848 420 aa16.86■□□□□ 0.29
COL18A1-204ENST00000400337 CAMLGP49069 296 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms