RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 DNAJC27Q9NZQ0 273 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 TESQ9UGI8 421 aaKnown RBP10.59□□□□□ -0.71
SKA3-203ENST00000400018 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 H3BNH8 94 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 J3QRK9 145 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 FAAHO00519 579 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 NUP107P57740 925 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 OR1C1Q15619 314 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ABHD17BQ5VST6 288 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 IRAK1BP1Q5VVH5 260 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 LYPD4Q6UWN0 246 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 BBS1Q8NFJ9 593 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 POC1BQ8TC44 478 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ZPLD1Q8TCW7 415 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 KCNE4Q8WWG9 221 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 BORCS5Q969J3 196 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ZNF559Q9BR84 538 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ZNF552Q9H707 407 aaPredicted RBP10.59□□□□□ -0.71
SKA3-203ENST00000400018 MED17Q9NVC6 651 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 TAS2R10Q9NYW0 307 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 SLC6A5Q9Y345 797 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 RAMP1O60894 148 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TPPPO94811 219 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 OR5F1O95221 314 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 CYB561P49447 251 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 P2RX1P51575 399 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 RPS3AP61247 264 aaKnown RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 TOP3AQ13472 1001 aaPredicted RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 GINS1Q14691 196 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 RTP5Q14D33 572 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 MBOAT2Q6ZWT7 520 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 ATG4DQ86TL0 474 aaPredicted RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 ENTHD1Q8IYW4 607 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TCEANCQ8N8B7 351 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 OR5W2Q8NH69 310 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 HCAR1Q9BXC0 346 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TTTY10Q9BZA0 68 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.58□□□□□ -0.72
SKA3-203ENST00000400018 POLE3Q9NRF9 147 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 CNOT11Q9UKZ1 510 aaKnown RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 RNF6Q9Y252 685 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 SLC35A3Q9Y2D2 325 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 ORC6Q9Y5N6 252 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 SEC14L5O43304 696 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 CHP2O43745 196 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 PRKYO43930 277 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 SUSD5O60279 629 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 SLC25A12O75746 678 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TFPIP10646 304 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 NR4A1P22736 598 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 AQP2P41181 271 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 SLC6A19Q695T7 634 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 ULK3Q6PHR2 472 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 GRAMD2AQ8IUY3 354 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 C17orf47Q8NEP4 570 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 OR4K17Q8NGC6 315 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 OR8K3Q8NH51 312 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 PIGXQ8TBF5 258 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 PHF3Q92576 2039 aaKnown RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 HPS1Q92902 700 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 FGF11Q92914 225 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 PCNX1Q96RV3 2341 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TSSK6Q9BXA6 273 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 LAT2Q9GZY6 243 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 PAK1IP1Q9NWT1 392 aaPredicted RBP10.58□□□□□ -0.72
SKA3-203ENST00000400018 ZNF226Q9NYT6 803 aa10.58□□□□□ -0.72
SKA3-203ENST00000400018 TMED7-TICAM2A0A0A6YYA0 188 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 MCIDASD6RGH6 385 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 PPP1R3DO95685 299 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 GPANK1O95872 356 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 PRKCAP17252 672 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 AHCYP23526 432 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 CRISP1P54107 249 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 FHL1Q13642 323 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ZNF829Q3KNS6 432 aaPredicted RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 C1orf94Q6P1W5 598 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RFPL4BQ6ZWI9 263 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ZNF555Q8NEP9 628 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 OR2M3Q8NG83 312 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 CHPT1Q8WUD6 406 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 APH1BQ8WW43 257 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 EXTL1Q92935 676 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 GABARAPL1Q9H0R8 117 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 Q9H521 79 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RERGLQ9H628 205 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ZNF71Q9NQZ8 489 aaPredicted RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 RAB26Q9ULW5 256 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 TMED7Q9Y3B3 224 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 MED31Q9Y3C7 131 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 A0A087WUJ7 227 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms