RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 CADM2Q8N3J6 435 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 DPP10Q8N608 796 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 APH1AQ96BI3 265 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 MALT1Q9UDY8 824 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 LEF1Q9UJU2 399 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 DCTN4Q9UJW0 460 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 LIPT2A6NK58 231 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 A8MVM7 634 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 EVPLLA8MZ36 301 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM229AB2RXF0 380 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 TMCC2O75069 709 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 MRPL33O75394 65 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 LYZL6O75951 148 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 IGHV1-2P23083 117 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 RIPPLY3P57055 190 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 CDK6Q00534 326 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 FOXD4Q12950 439 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 SLC17A1Q14916 467 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 TIMM23BQ5SRD1 257 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 SHEQ5VZ18 495 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 DHRS4L2Q6PKH6 230 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF433Q8N7K0 673 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 STK35Q8TDR2 534 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 IGFBPL1Q8WX77 278 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 C3orf49Q96BT1 292 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 CCL19Q99731 98 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 CPPED1Q9BRF8 314 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 IKZF5Q9H5V7 419 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 PIF1Q9H611 641 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 ESRP2Q9H6T0 727 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 NPHS2Q9NP85 383 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 DLL4Q9NR61 685 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 NDUFAF1Q9Y375 327 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 FLVCR1Q9Y5Y0 555 aa13.14□□□□□ -0.31
SMIM11A-203ENST00000399299 HS3ST1O14792 307 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 ARHGEF9O43307 516 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 SMPD2O60906 423 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 NPIPB7O75200 414 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 FOSL1P15407 271 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 GGT1P19440 569 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 NTF4P34130 210 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 NKX6-1P78426 367 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 SCARB2Q14108 478 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 RUNDC3AQ59EK9 446 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 DHDDSQ86SQ9 333 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF611Q8N823 705 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 LSMEM1Q8N8F7 131 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 BHLHE22Q8NFJ8 381 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 THOC1Q96FV9 657 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 SF3B5Q9BWJ5 86 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 ASB6Q9NWX5 421 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 TAS2R16Q9NYV7 291 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
SMIM11A-203ENST00000399299 CADP27708 2225 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 A0A0G2JND7 137 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 PRORSD1PA6NEY8 169 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 OR5H1A6NKK0 313 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 ANGPT2O15123 496 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 FRS3O43559 492 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 FZD7O75084 574 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 VAMP5O95183 116 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 PLAUP00749 431 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 SLC6A2P23975 617 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 ADSLP30566 484 aaPredicted RBP13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 BNIP2Q12982 314 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 CAPRIN1Q14444 709 aaKnown RBP13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 PPA1Q15181 289 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 OR7A5Q15622 319 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 ADRM1Q16186 407 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 C1orf140Q5VVS0 124 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 CASP12Q6UXS9 341 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 HIPK4Q8NE63 616 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 MUCL1Q96DR8 90 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 ZNF607Q96SK3 696 aa13.12□□□□□ -0.31
SMIM11A-203ENST00000399299 CGREF1Q99674 301 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms