RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 GABRA1P14867 456 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PTH2RP49190 550 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 P2RX1P51575 399 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 DPTQ07507 201 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 GK2Q14410 553 aaPredicted RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 GRM7Q14831 915 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 HDDC3Q8N4P3 179 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR52E2Q8NGJ4 325 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR1S1Q8NH92 325 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 SYNPRQ8TBG9 265 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 TNFRSF13CQ96RJ3 184 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 FKRPQ9H9S5 495 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 MEPEQ9NQ76 525 aaPredicted RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 ANKRD20A5PA0PJZ0 165 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 DUXAA6NLW8 204 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 IDSB3KWA1 339 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 AIPO00170 330 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 TPPPO94811 219 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PCDH8O95206 1070 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 LYPD3O95274 346 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 ZNF35P13682 527 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PPP3CBP16298 524 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 DPP4P27487 766 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 BTN3A2P78410 334 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 NTHL1P78549 312 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 MLF2Q15773 248 aaPredicted RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 ETFDHQ16134 617 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 RPE65Q16518 533 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 TTLQ8NG68 377 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR4K13Q8NH42 304 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 MS4A4EQ96PG1 132 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 GLS2Q9UI32 602 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PYCARD-AS1I3L0S3 204 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 SPDEFO95238 335 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 LAMP2P13473 410 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 H2BFSP57053 126 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 EIPR1Q53HC9 387 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 SDF2Q99470 211 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 FOXJ3Q9UPW0 622 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 A0A087WV48 116 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 ITGA10O75578 1167 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 IGF2P01344 180 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 SNRPNP63162 240 aaKnown RBP12.87□□□□□ -0.35
APOB-202ENST00000399256 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 PDZD9Q8IXQ8 264 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 RNF113BQ8IZP6 322 aaKnown RBP12.87□□□□□ -0.35
APOB-202ENST00000399256 CXorf40AQ8TE69 158 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 ZDHHC4Q9NPG8 344 aa12.87□□□□□ -0.35
APOB-202ENST00000399256 ZNF749O43361 778 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 NDUFA2O43678 99 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 NDUFB6O95139 128 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 CDK2P24941 298 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ADH7P40394 386 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 PPP2CBP62714 309 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 PPP2CAP67775 309 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 RIPPLY1Q0D2K3 151 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 STX4Q12846 297 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ARHGAP11BQ3KRB8 267 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 AMZ1Q400G9 498 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 OR7E24Q6IFN5 339 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 TMPRSS11FQ6ZWK6 438 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 NRROSQ86YC3 692 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 SLC35F2Q8IXU6 374 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 KREMEN2Q8NCW0 462 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 S100A16Q96FQ6 103 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 GOSR2O14653 212 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 GRPRP30550 384 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 DUSP8Q13202 625 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 B3GNTL1Q67FW5 361 aaPredicted RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 RAB42Q8N4Z0 105 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 PNPLA2Q96AD5 504 aa12.86□□□□□ -0.35
APOB-202ENST00000399256 MRPS24Q96EL2 167 aaKnown RBP12.86□□□□□ -0.35
APOB-202ENST00000399256 COX14Q96I36 57 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms