RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RBMS3Q6XE24 437 aaKnown RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF782Q6ZMW2 699 aaPredicted RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SCD5Q86SK9 330 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4K2Q8NGD2 314 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PROKR1Q8TCW9 393 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TM9SF4Q92544 642 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC46A1Q96NT5 459 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RTP3Q9BQQ7 232 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 GALPQ9UBC7 116 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CRLS1Q9UJA2 301 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 GNG8Q9UK08 70 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RASD1Q9Y272 281 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CUL9Q8IWT3 2517 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 F5H5T6 163 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PRSS23O95084 383 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 LCATP04180 440 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TK1P04183 234 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CTPS1P17812 591 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 NPR2P20594 1047 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CD27P26842 260 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB31Q13636 194 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB30Q15771 203 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 COX19Q49B96 90 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TBPL2Q6SJ96 375 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 DLEU7Q6UYE1 221 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF562Q6V9R5 426 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TSPAN33Q86UF1 283 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 C19orf47Q8N9M1 422 aaKnown RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CAMKVQ8NCB2 501 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 DNAAF1Q8NEP3 725 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ULK4Q96C45 1275 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TEX37Q96LM6 180 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 HARBI1Q96MB7 349 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 APOL4Q9BPW4 351 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TTYH2Q9BSA4 534 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC52A3Q9NQ40 469 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SMPD4Q9NXE4 827 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PTTG3PQ9NZH4 202 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 MARCH2Q9P0N8 246 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SLAMF8Q9P0V8 285 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TRIP12Q14669 1992 aaPredicted RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 LOC100130705A0A1B0GUX0 176 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ASPDHA6ND91 283 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 M0QZQ0 153 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC28A1O00337 649 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CXCR6O00574 342 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 BHLHE40O14503 412 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CXCL14O95715 111 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 G6PDP11413 515 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB3BP20337 219 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SERPINA2P20848 420 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 IGFBP6P24592 240 aaPredicted RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PSMB5P28074 263 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 AGTR2P50052 363 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 LSM6P62312 80 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PSG3Q16557 428 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 HAGHQ16775 308 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MEP1AQ16819 746 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 DCAF10Q5QP82 559 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SYT6Q5T7P8 510 aaPredicted RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 FBXL22Q6P050 247 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ABHD17CQ6PCB6 329 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CHST9Q7L1S5 443 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CPNE9Q8IYJ1 553 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM132CQ8N3T6 1108 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB40AQ8WXH6 277 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM45BQ96B21 275 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ALKBH3Q96Q83 286 aaPredicted RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MYOCQ99972 504 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 BOCQ9BWV1 1114 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF350Q9GZX5 532 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 NIPAL2Q9H841 368 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 IPPKQ9H8X2 491 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 NECTIN3Q9NQS3 549 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PPIEQ9UNP9 301 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PLXNA3P51805 1871 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 VSTM2BA6NLU5 285 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC1A7O00341 560 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TGOLN2O43493 480 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SNAI2O43623 268 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 NME6O75414 186 aaPredicted RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 GADD45GO95257 159 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ESR1P03372 595 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PRDX3P30048 256 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 POLR2IP36954 125 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 OPRL1P41146 370 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 RPL38P63173 70 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 RPL19P84098 196 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TNK1Q13470 666 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 XAF1Q6GPH4 301 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 VN1R5Q7Z5H4 357 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SPNS2Q8IVW8 549 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM98AQ8NCA5 519 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 OR10A6Q8NH74 314 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM234Q8WY98 164 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PPP1R16AQ96I34 528 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ST6GAL2Q96JF0 529 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms