RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ADH6P28332 368 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 CD79BP40259 229 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 RAB31Q13636 194 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ACOT13Q9NPJ3 140 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SERINC4A6NH21 518 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 LILRB5O75023 590 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 FGL1Q08830 312 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SLC14A2Q15849 920 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SFRP5Q5T4F7 317 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 NUDT7P0C024 238 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 RAD52P43351 418 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 LGALS4P56470 323 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 RUNX2Q13950 521 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 AADACL4Q5VUY2 407 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 DCAF13Q9NV06 445 aaKnown RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 MDFIC2A0A1B0GVS7 189 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 OR7A17O14581 309 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 OR7C1O76099 320 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 TBC1D28Q2M2D7 210 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 VWA2Q5GFL6 755 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 B3GLCTQ6Y288 498 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SORCS2Q96PQ0 1159 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 OBP2AQ9NY56 170 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 TRGV8A0A0C4DH27 118 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 RAB3DO95716 219 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 GPX3P22352 226 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 HOXA1P49639 335 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 RPP30P78346 268 aaKnown RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 MS4A2Q01362 244 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 HNF4GQ14541 408 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 COQ5Q5HYK3 327 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ZNF534Q76KX8 674 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SIMC1Q8NDZ2 872 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SSX3Q99909 188 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 NLKQ9UBE8 527 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 UBQLN2Q9UHD9 624 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 OR5K3A6NET4 321 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 IGFBP6P24592 240 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 LIM2P55344 173 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 EDDM3AQ14507 147 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ZNF181Q2M3W8 571 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 ZNF813Q6ZN06 617 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 MEPCEQ7L2J0 689 aaKnown RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 PRAMEF27A3QJZ7 478 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 CYB5BO43169 146 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 WNT11O96014 354 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 PPP2CBP62714 309 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 PPP2CAP67775 309 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SELPLGQ14242 412 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 PRAMEF9Q5VWM5 478 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 CCL4L1Q8NHW4 92 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 SLC19A3Q9BZV2 496 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 MAGED1Q9Y5V3 778 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 CDK5RAP2Q96SN8 1893 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 CD1CP29017 333 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 TMEM71Q6P5X7 295 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 TBPL2Q6SJ96 375 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 GNG12Q9UBI6 72 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 TOR1AO14656 332 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 PRRG2O14669 202 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 NXPH2O95156 264 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 FAM83FQ8NEG4 500 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 GOT1L1Q8NHS2 421 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 ACOT11Q8WXI4 607 aaPredicted RBP10.54□□□□□ -0.72
TTC28-201ENST00000397906 RLIMQ9NVW2 624 aa10.54□□□□□ -0.72
TTC28-201ENST00000397906 A0A0G2JMP0 313 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PRAMEF25A6NGN4 478 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 D6RAR5 112 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PRICKLE3O43900 615 aaPredicted RBP10.53□□□□□ -0.72
TTC28-201ENST00000397906 NXPH3O95157 252 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 HOXA9P31269 272 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 METTL4Q8N3J2 472 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 OR4M2Q8NGB6 313 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 CENPBD1B2RD01 187 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 TSFMP43897 325 aaKnown RBP10.53□□□□□ -0.72
TTC28-201ENST00000397906 TGM4P49221 684 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 MRGPRX1Q96LB2 322 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 CACNG6Q9BXT2 260 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 LUZP4Q9P127 313 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SLC23A2Q9UGH3 650 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 NCR1O76036 304 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 MT-CO2P00403 227 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
TTC28-201ENST00000397906 TMEM244Q5VVB8 128 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PRSS48Q7RTY5 328 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SULF2Q8IWU5 870 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 BCL7CQ8WUZ0 217 aaPredicted RBP10.53□□□□□ -0.72
TTC28-201ENST00000397906 VEGFCP49767 419 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 BORCS7Q96B45 105 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms