RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZNF264O43296 627 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 OIP5O43482 229 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SCO2O43819 266 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 PSMA1P25786 263 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SSR4P51571 173 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 MLLT11Q13015 90 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 NTRK2Q16620 822 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF791Q3KP31 576 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 DCAF10Q5QP82 559 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 H3F3CQ6NXT2 135 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 OPN5Q6U736 354 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 NANOGP1Q8N7R0 232 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 OR9Q1Q8NGQ5 310 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SLC7A13Q8TCU3 470 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 HHATLQ9HCP6 504 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 EXOSC3Q9NQT5 275 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 PCSK5Q92824 1860 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 NINQ8N4C6 2090 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 TRAPPC13A5PLN9 417 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 H3BN98 237 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 THY1P04216 161 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 SKP2Q13309 424 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 TRAM2Q15035 370 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 CBLN3Q6UW01 205 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 GDF7Q7Z4P5 450 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 SIRT6Q8N6T7 355 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 OR10G3Q8NGC4 313 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 BRIX1Q8TDN6 353 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 ASB15Q8WXK1 588 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 IL4I1Q96RQ9 567 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 TRIM2Q9C040 744 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 LAT2Q9GZY6 243 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 INIPQ9NRY2 104 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 MRPS18AQ9NVS2 196 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 NDUFB11Q9NX14 153 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 SLC7A7Q9UM01 511 aa17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 DIMT1Q9UNQ2 313 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-204ENST00000397760 TP53P04637 393 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ADRA2AP08913 450 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SPINK2P20155 84 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF91Q05481 1191 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SRSF6Q13247 344 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ATP1A1-AS1Q5TC04 95 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 C1orf94Q6P1W5 598 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 PODNL1Q6PEZ8 512 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 IL20RBQ6UXL0 311 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SETD6Q8TBK2 473 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 FER1L6-AS2Q96M78 137 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ANKRD19PQ9H560 264 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ATP13A2Q9NQ11 1180 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 TAS2R16Q9NYV7 291 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 STUB1Q9UNE7 303 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 HCRTR2O43614 444 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 GPX5O75715 221 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 APOA1P02647 267 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 PCYT1AP49585 367 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF117Q03924 483 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 CLN3Q13286 438 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SOWAHCQ53LP3 525 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 B3GNTL1Q67FW5 361 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 JMJD6Q6NYC1 403 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF613Q6PF04 617 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 NKAIN4Q8IVV8 208 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 TMEM156Q8N614 296 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 LSMEM1Q8N8F7 131 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 HPS1Q92902 700 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 WDFY2Q96P53 400 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SLC30A2Q9BRI3 323 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SCNM1Q9BWG6 230 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 TSSK6Q9BXA6 273 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 RNF167Q9H6Y7 350 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 ISYNA1Q9NPH2 558 aa17.61■□□□□ 0.41
PDLIM2-204ENST00000397760 SLC35F4A4IF30 521 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 SNTNA6NMZ2 147 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF670-ZNF695F2Z2N8 137 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 TP53I11O14683 189 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 EIF4E2O60573 245 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 IFNGR2P38484 337 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 CCR4P51679 360 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 EFNB1P98172 346 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 CDK5Q00535 292 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 AIMP2Q13155 320 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 KLHL22Q53GT1 634 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 NCCRP1Q6ZVX7 275 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 MISPQ8IVT2 679 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 CADM2Q8N3J6 435 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 RNF138Q8WVD3 245 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 PSMF1Q92530 271 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 CEP19Q96LK0 163 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 ASPNQ9BXN1 380 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 POLE4Q9NR33 117 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 RYDENQ9NUL5 291 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 QPCTLQ9NXS2 382 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 RPS6KB2Q9UBS0 482 aa17.6■□□□□ 0.41
PDLIM2-204ENST00000397760 A0A1B0GWA3 101 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 C17orf51A8MQB3 221 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 ADAM10O14672 748 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 GIPRP48546 466 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 RORCP51449 518 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms