RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SLC38A3Q99624 504 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SLC19A3Q9BZV2 496 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 C20orf85Q9H1P6 137 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SCPEP1Q9HB40 452 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 DEC1Q9P2X7 70 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 MBD1Q9UIS9 605 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 EXOGQ9Y2C4 368 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RBM7Q9Y580 266 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 U3KQ87 197 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RNGTTO60942 597 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SOD1P00441 154 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GDNFP39905 211 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 LASP1Q14847 261 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 NFATC4Q14934 902 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 KIAA1324Q6UXG2 1013 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PARS2Q7L3T8 475 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CPOQ8IVL8 374 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR51A7Q8NH64 312 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SFXN2Q96NB2 322 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF582Q96NG8 517 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 AMDHD1Q96NU7 426 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 BARHL1Q9BZE3 327 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ASH2LQ9UBL3 628 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 FAM227AF5H4B4 570 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RFXAPO00287 272 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SEMA7AO75326 666 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RENP00797 406 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ASGR2P07307 311 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TYRP14679 529 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CHATP28329 748 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 S100A11P31949 105 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ALDH3B1P43353 468 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 NDUFA6P56556 154 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 C5orf34Q96MH7 638 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RNF32Q9H0A6 362 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SMG9Q9H0W8 520 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 MIXL1Q9H2W2 232 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GHITMQ9H3K2 345 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 C12orf10Q9HB07 376 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 KCNK12Q9HB15 430 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 NYNRINQ9P2P1 1898 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GRXCR1A8MXD5 290 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CYB5AP00167 134 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GKP32189 559 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 MPIP34949 423 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RAP2BP61225 183 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PODNL1Q6PEZ8 512 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CORO6Q6QEF8 472 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 KCT2Q8NC54 265 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CLRN3Q8NCR9 226 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SLC25A36Q96CQ1 311 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PBDC1Q9BVG4 233 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SMIM3Q9BZL3 60 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CSNK1G3Q9Y6M4 447 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RHPN2P1A8MT19 583 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 LEUTXA8MZ59 168 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CTDSPLO15194 276 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 HMGN2P05204 90 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CSF1P09603 554 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZP3P21754 424 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF77Q15935 545 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 C14orf28Q4W4Y0 310 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TAS1R1Q7RTX1 841 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 FAM122BQ7Z309 247 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RELL2Q8NC24 303 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF248Q8NDW4 579 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR4F15Q8NGB8 312 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RERGQ96A58 199 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SCGB3A2Q96PL1 93 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR2M4Q96R27 311 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF426Q9BUY5 554 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 C1QTNF2Q9BXJ5 285 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CAMK2AQ9UQM7 478 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TRAV1-2A0A0B4J238 106 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 A0A0B4J2A0 478 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 URADA6NGE7 173 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 RNF13O43567 381 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TPT1P13693 172 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 CSF2RAP15509 400 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 MAOAP21397 527 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 AK4P27144 223 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PPT1P50897 306 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 COX20Q5RI15 118 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 MANEAQ5SRI9 462 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GLT8D1Q68CQ7 371 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SLC48A1Q6P1K1 146 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PAPD4Q6PIY7 484 aaKnown RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 FAM71CQ8NEG0 241 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 VN1R2Q8NFZ6 395 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR4E2Q8NGC2 313 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR4M1Q8NGD0 313 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR6T1Q8NGN1 323 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR6N2Q8NGY6 317 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 NSMAFQ92636 917 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TMPRSS13Q9BYE2 586 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SHPKQ9UHJ6 478 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TRBV23OR9-2A0A075B6M9 112 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TRBV4-1A0A0J9YWV2 114 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms