RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RPL3P39023 403 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 SLC1A3P43003 542 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 NAAAQ02083 359 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 SLC17A1Q14916 467 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 RFTN2Q52LD8 501 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 HIKESHIQ53FT3 197 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 AP1ARQ63HQ0 302 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ZYG11AQ6WRX3 759 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 RBMS3Q6XE24 437 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 EIF3MQ7L2H7 374 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 GRINAQ7Z429 371 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ABHD12BQ7Z5M8 362 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ADGRG3Q86Y34 549 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 NATD1Q8N6N6 113 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 FAM169BQ8N8A8 192 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 FAM71CQ8NEG0 241 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 NUP37Q8NFH4 326 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 OR2T11Q8NH01 316 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 OR51F2Q8NH61 342 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 CLHC1Q8NHS4 586 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 OIT3Q8WWZ8 545 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 OR5P2Q8WZ92 322 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 UBE2FQ969M7 185 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 MOAP1Q96BY2 351 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 DOK1Q99704 481 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 PIF1Q9H611 641 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF442Q9H7R0 627 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 MOV10Q9HCE1 1003 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 CTPS2Q9NRF8 586 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 ARPC4-TTLL3A0A0A6YYG9 625 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CENPVL1A0A0U1RR11 272 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 EXOC1LA0A1B0GW35 172 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 DUXAA6NLW8 204 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 VSTM5A8MXK1 200 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 G3V2L1 256 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 M0QZ24 198 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 KLF11O14901 512 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 UGT2B17O75795 530 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 AVPP01185 164 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 IGLV1-44P01699 117 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 IGFBP1P08833 259 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CECR9P0C854 216 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 MYL2P10916 166 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 LAMP1P11279 417 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 BCKDHAP12694 445 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 ADRA2CP18825 462 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 GCAP28676 217 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 PGM1P36871 562 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 HPCAL1P37235 193 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 OR2B6P58173 313 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 DNAJB13P59910 316 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 RPL38P63173 70 aaKnown RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 SLC35A1P78382 337 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 POU3F1Q03052 451 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 SRSF4Q08170 494 aaKnown RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 GPR68Q15743 365 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 ARHGAP11BQ3KRB8 267 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 LSM12Q3MHD2 195 aaKnown RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 TBRG1Q3YBR2 411 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CFAP157Q5JU67 520 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CLEC6AQ6EIG7 209 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 C8orf74Q6P047 294 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 ANKRD16Q6P6B7 361 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 PAQR6Q6TCH4 344 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 C1QL2Q7Z5L3 287 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 OR7A2PQ8NGA2 310 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CLDND2Q8NHS1 167 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF563Q8TA94 476 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.113e-6■□□□□ 9.4
NEDD9-203ENST00000397378 PMM1Q92871 262 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 NAA11Q9BSU3 229 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 SF3B5Q9BWJ5 86 aaKnown RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 OR11A1Q9GZK7 315 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF350Q9GZX5 532 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM45AQ9NWC5 275 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 PDP1Q9P0J1 537 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-203ENST00000397378 DCDC2Q9UHG0 476 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 EMCNQ9ULC0 261 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 PCDHGB4Q9UN71 923 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 SLC35A3Q9Y2D2 325 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
NEDD9-203ENST00000397378 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 ZNF208O43345 1280 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 FCMRO60667 390 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 TFP02787 698 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 GUSBP08236 651 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 IMPDH2P12268 514 aa8.12□□□□□ -1.11
NEDD9-203ENST00000397378 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-203ENST00000397378 CDH2P19022 906 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms