RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 DNAJA4Q8WW22 397 aaPredicted RBP12.36□□□□□ -0.43
SEC13-204ENST00000397099 MAL2Q969L2 176 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 ZC3HAV1LQ96H79 300 aaKnown RBP12.36□□□□□ -0.43
SEC13-204ENST00000397099 ANKRD27Q96NW4 1050 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 TMUB1Q9BVT8 246 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 TRIM2Q9C040 744 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 OR11A1Q9GZK7 315 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 ANGPT4Q9Y264 503 aa12.36□□□□□ -0.43
SEC13-204ENST00000397099 NIPBLQ6KC79 2804 aaeCLIP12.35□□□□□ -0.43
SEC13-204ENST00000397099 FLNAP21333 2647 aaKnown RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ZNF814B7Z6K7 855 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 KLF4O43474 513 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ATP8B1O43520 1251 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 OR2T1O43869 369 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 THBDP07204 575 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 NUDT7P0C024 238 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 CD53P19397 219 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 CCNA2P20248 432 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 COX5AP20674 150 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 PAX7P23759 505 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 NCALDP61601 193 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 TGFBR3Q03167 851 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 SCARB2Q14108 478 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 TIMM23BQ5SRD1 257 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 FAM91A1Q658Y4 838 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 C6orf89Q6UWU4 347 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 BHLHA15Q7RTS1 189 aaPredicted RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 SERPINA11Q86U17 422 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 LRRC75A-AS1Q8N1F1 130 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 NFKBIDQ8NI38 313 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 S100PBPQ96BU1 408 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ZNF300Q96RE9 604 aaPredicted RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 CGREF1Q99674 301 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 CPPED1Q9BRF8 314 aaPredicted RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 ASB6Q9NWX5 421 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 SELENONQ9NZV5 590 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 MALT1Q9UDY8 824 aa12.35□□□□□ -0.43
SEC13-204ENST00000397099 TESQ9UGI8 421 aaKnown RBP12.35□□□□□ -0.43
SEC13-204ENST00000397099 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 LIPT2A6NK58 231 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 AQP7P3A6NL99 342 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 BBIP1A8MTZ0 92 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 SLC22A2O15244 555 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 C8BP07358 591 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 GGT1P19440 569 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 ARFIP2P53365 341 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 FOXD4Q12950 439 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 NFYCQ13952 458 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 MFSD13AQ14CX5 517 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 OTUD3Q5T2D3 398 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 SWT1Q5T5J6 900 aaKnown RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 INTS11Q5TA45 600 aaKnown RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 C1orf140Q5VVS0 124 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 TMEM225Q6GV28 225 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 NET1Q7Z628 596 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
SEC13-204ENST00000397099 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 RASSF5Q8WWW0 418 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 TMEM45BQ96B21 275 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 C3orf49Q96BT1 292 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
SEC13-204ENST00000397099 MTORP42345 2549 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 TMEM229AB2RXF0 380 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 SIAH2O43255 324 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 FMO6PO60774 539 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 NPIPB7O75200 414 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 AHSA1O95433 338 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 IMPDH2P12268 514 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 GTF2E2P29084 291 aaKnown RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 ADAM8P78325 824 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 CEACAM7Q14002 265 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 OR7A5Q15622 319 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 TAB1Q15750 504 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 ULK3Q6PHR2 472 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 PATL1Q86TB9 770 aaKnown RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 CCDC103Q8IW40 242 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 POMGNT2Q8NAT1 580 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms