RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NDUFAF7Q7L592 441 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ZPLD1Q8TCW7 415 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 STK35Q8TDR2 534 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 WASH6PQ9NQA3 447 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 MBNL1Q9NR56 388 aaKnown RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 MYEF2Q9P2K5 600 aaKnown RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TRAPPC13A5PLN9 417 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 SYT5O00445 386 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 HIST1H1CP16403 213 aaKnown RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ACHEP22303 614 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 CDK2P24941 298 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 H2BFSP57053 126 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 SORDQ00796 357 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 METTL11BQ5VVY1 283 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 RD3Q7Z3Z2 195 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 RANBP3LQ86VV4 465 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TOX2Q96NM4 488 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 SLC6A20Q9NP91 592 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 CD93Q9NPY3 652 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ST6GALNAC2Q9UJ37 374 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 KCNE5Q9UJ90 142 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 LOC100509620A0A075B734 347 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 RHOP08100 348 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 SRMP19623 302 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 AK4P27144 223 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 NDUFAF6Q330K2 333 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MFSD12Q6NUT3 480 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 LILRA6Q6PI73 481 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 GRASPQ7Z6J2 395 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 IFT46Q9NQC8 304 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MOKQ9UQ07 419 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 IER3IP1Q9Y5U9 82 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 PIN1P1O15428 100 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 RLN2P04090 185 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF888P0CJ79 500 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 NT5EP21589 574 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 NDUFS1P28331 727 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 PPM1AP35813 382 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 PRMT2P55345 433 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 SIRPAP78324 504 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 LGALS3BPQ08380 585 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MRM1Q6IN84 353 aaKnown RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 RADILQ96JH8 1075 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 ULBP3Q9BZM4 244 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MRTO4Q9UKD2 239 aaKnown RBP13.18□□□□□ -0.3
CLIP2-203ENST00000395060 SIGLEC7Q9Y286 467 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
CLIP2-203ENST00000395060 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ARL6IP5O75915 188 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CSN2P05814 226 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 EPCAMP16422 314 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 UGT2B7P16662 529 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 S100A11P31949 105 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 OR7E24Q6IFN5 339 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 FAM199XQ6PEV8 388 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 TMED4Q7Z7H5 227 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GJD3Q8N144 294 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 LNX2Q8N448 690 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GIMAP5Q96F15 307 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 FOXN4Q96NZ1 517 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GFI1Q99684 422 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ACTR6Q9GZN1 396 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 KRCC1Q9NPI7 259 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 MDC1Q14676 2089 aaKnown RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CACNB4O00305 520 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 KCNAB3O43448 404 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CLEC3AO75596 197 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 SEC61A1P61619 476 aaKnown RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 DHCR24Q15392 516 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PCGF3Q3KNV8 242 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 TMPRSS12Q86WS5 348 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF511Q8NB15 262 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 HAVCR2Q8TDQ0 301 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms