RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR5K2Q8NHB8 316 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 RASD2Q96D21 266 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 SGTBQ96EQ0 304 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 PINK1Q9BXM7 581 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 ACTRT3Q9BYD9 372 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 ACTR6Q9GZN1 396 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
NFKB1-202ENST00000394820 MKKSQ9NPJ1 570 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-202ENST00000394820 AKAP7Q9P0M2 348 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-202ENST00000394820 CENPVL1A0A0U1RR11 272 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PRAMEF27A3QJZ7 478 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 OPN1LWP04000 364 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PRRT3Q5FWE3 981 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 SLC6A19Q695T7 634 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 GJD3Q8N144 294 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 DEFB119Q8N690 84 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 SETD7Q8WTS6 366 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 CNOT9Q92600 299 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 KCTD12Q96CX2 325 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PTDSS2Q9BVG9 487 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 SCML1Q9UN30 329 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 SLC6A5Q9Y345 797 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 AHCTF1Q8WYP5 2266 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 IMPA2O14732 288 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PEX14O75381 377 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ITGA10O75578 1167 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ATP5A1P25705 553 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 FAUP35544 74 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 LCTLQ6UWM7 567 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ZFP82Q8N141 532 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 CCL4L1Q8NHW4 92 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PMM1Q92871 262 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 NXF2Q9GZY0 626 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 LIN7BQ9HAP6 207 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 IL21RQ9HBE5 538 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 A4GALTQ9NPC4 353 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ZSCAN32Q9NX65 697 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 GXYLT2A0PJZ3 443 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 M0QYG6 137 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 IFNA6P05013 189 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PKLRP30613 574 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 MAP3K8P41279 467 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 PRDX1Q06830 199 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 UNQ6126/PRO20091Q6UXV3 157 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ETFBKMTQ8IXQ9 262 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ELP4Q96EB1 424 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 TRIM2Q9C040 744 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 KCNK15Q9H427 330 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 SDHAF2Q9NX18 166 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 KLHL9Q9P2J3 617 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 LAMP5Q9UJQ1 280 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 GPR34Q9UPC5 381 aa12.22□□□□□ -0.45
NFKB1-202ENST00000394820 ZNF443Q9Y2A4 671 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 TCF20Q9UGU0 1960 aaKnown RBP12.22□□□□□ -0.45
NFKB1-202ENST00000394820 TMEM229AB2RXF0 380 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 LINC01565O15544 149 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 SPARCP09486 303 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 AKR1C4P17516 323 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 MAOBP27338 520 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 SLC6A6P31641 620 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 ARL4DP49703 201 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 ENPP2Q13822 863 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 AANATQ16613 207 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 C1orf94Q6P1W5 598 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 RNF165Q6ZSG1 346 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 Q6ZTK2 550 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 GRAMD2AQ8IUY3 354 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 PDZD9Q8IXQ8 264 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 CMTM4Q8IZR5 234 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 TCTE3Q8IZS6 198 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 BEST3Q8N1M1 668 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 OR7G2Q8NG99 324 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 OR51D1Q8NGF3 324 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 OR5M1Q8NGP8 315 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 THAP3Q8WTV1 239 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-202ENST00000394820 PATE1Q8WXA2 126 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 CXorf58Q96LI9 332 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 ZNF436Q9C0F3 470 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-202ENST00000394820 PCBD2Q9H0N5 130 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 MTHFD2LQ9H903 347 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-202ENST00000394820 CEP250Q9BV73 2442 aa12.21□□□□□ -0.45
NFKB1-202ENST00000394820 LRIT2A6NDA9 550 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 SGK494L7N484 410 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF593O00488 134 aaPredicted RBP12.21□□□□□ -0.46
NFKB1-202ENST00000394820 SERPINA3P01011 423 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 CSTAP01040 98 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 CTSEP14091 401 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 HTR1FP30939 366 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 HMGA2P52926 109 aa12.21□□□□□ -0.46
NFKB1-202ENST00000394820 ERVK-21P61565 698 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms