RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SLCO1B1Q9Y6L6 691 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 KNL1Q8NG31 2342 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 PCDH15Q96QU1 1955 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ADAMTS20P59510 1910 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 TRAV1-2A0A0B4J238 106 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 C2orf92A0A1B0GVN3 265 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 A0A1W2PQD3 144 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ANKRD61A6NGH8 418 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 OR6C76A6NM76 312 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 MCIDASD6RGH6 385 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 LRRTM2O43300 516 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GPRIN2O60269 458 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 TRIM3O75382 744 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GATBO75879 557 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PIAS2O75928 621 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 UTS2O95399 124 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CLPSP04118 112 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CLUP10909 449 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 IL9P15248 144 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 RAB3BP20337 219 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 FBLP22087 321 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 IL12BP29460 328 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PYCR1P32322 319 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 RFX2P48378 723 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 DIO1P49895 249 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CAV3P56539 151 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SLC3A1Q07837 685 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CD300CQ08708 224 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SKP2Q13309 424 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 FHL1Q13642 323 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CDK5R1Q15078 307 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 IDNKQ5T6J7 187 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 FNDC7Q5VTL7 733 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 DMKNQ6E0U4 476 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SFXN4Q6P4A7 337 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 RPL22L1Q6P5R6 122 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PLET1Q6UQ28 207 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 BAIAP2L2Q6UXY1 529 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 B3GLCTQ6Y288 498 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CEACAM19Q7Z692 300 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PXKQ7Z7A4 578 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ATG4DQ86TL0 474 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 RDH10Q8IZV5 341 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SCAIQ8N9R8 606 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 OR4C3Q8NH37 302 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ABHD4Q8TB40 342 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SNX33Q8WV41 574 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ITFG2Q969R8 447 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ZMYND19Q96E35 227 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SENP5Q96HI0 755 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 HSPA12BQ96MM6 686 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 DCLRE1CQ96SD1 692 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PHOX2BQ99453 314 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 TIMP4Q99727 224 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SPRTNQ9H040 489 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PPP1R3EQ9H7J1 279 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 NANSQ9NR45 359 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 KLHL1Q9NR64 748 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 PNO1Q9NRX1 252 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 LANCL2Q9NS86 450 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SACM1LQ9NTJ5 587 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 RBFOX1Q9NWB1 397 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 EXTL2Q9UBQ6 330 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 COPS7AQ9UBW8 275 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ZMIZ1Q9ULJ6 1067 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 NPFFR2Q9Y5X5 522 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GON4LQ3T8J9 2241 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 IGHV1OR21-1A0A087WYE8 117 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 IGKV3D-11A0A0A0MRZ8 115 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SHISA3A0PJX4 238 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 MEIOCA2RUB1 952 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ZNF879B4DU55 563 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GNB5O14775 395 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 OGG1O15527 345 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SSX4O60224 188 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CDC40O60508 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SC5DO75845 299 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 NCR1O76036 304 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GLCEO94923 617 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GYPBP06028 91 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CD14P08571 375 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SPI1P17947 270 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 APEX1P27695 318 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SDHAP31040 664 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 DDOSTP39656 456 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 GDI2P50395 445 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SLC25A1P53007 311 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 OR12D2P58182 307 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 CSTF1Q05048 431 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SMAD2Q15796 467 aaKnown RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ZNF74Q16587 644 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 NDUFAF6Q330K2 333 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 ACSM3Q53FZ2 586 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 EMC4Q5J8M3 183 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 WDR45BQ5MNZ6 344 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SLC6A19Q695T7 634 aa6.58□□□□□ -1.36
SMAD1-202ENST00000394092 NCCRP1Q6ZVX7 275 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-202ENST00000394092 SPATC1Q76KD6 591 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms