RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZG16BQ96DA0 208 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 PPCSQ9HAB8 311 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 CA10Q9NS85 328 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 PARPBPQ9NWS1 579 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ASIC5Q9NY37 505 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 OSGIN1Q9UJX0 560 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 TMED7Q9Y3B3 224 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 PRAMEF27A3QJZ7 478 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 RNASET2O00584 256 aaKnown RBP13.37□□□□□ -0.27
CHMP3-202ENST00000393773 KLF11O14901 512 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 ZNF208O43345 1280 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 TCF21O43680 179 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 OR12D1P0DN82 309 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 IL2RGP31785 369 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 SERPINF1P36955 418 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 HTR3AP46098 478 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 IDH2P48735 452 aaKnown RBP13.37□□□□□ -0.27
CHMP3-202ENST00000393773 KCNJ10P78508 379 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 EFNB3Q15768 340 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 PGS1Q32NB8 556 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 PAQR6Q6TCH4 344 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
CHMP3-202ENST00000393773 RAB8BQ92930 207 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 DDIT4LQ96D03 193 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 ZNF385AQ96PM9 386 aaKnown RBP13.37□□□□□ -0.27
CHMP3-202ENST00000393773 SLC38A2Q96QD8 506 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 VRK1Q99986 396 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-202ENST00000393773 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 OBP2BQ9NPH6 170 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
CHMP3-202ENST00000393773 LRP5LA4QPB2 252 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 B9A039 149 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 WIPF1O43516 503 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 SCN2BO60939 215 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 AGR2O95994 175 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 CDH2P19022 906 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-202ENST00000393773 GIFP27352 417 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 KHKP50053 298 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 POLR2HP52434 150 aaKnown RBP13.36□□□□□ -0.27
CHMP3-202ENST00000393773 CLDN8P56748 225 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 TBRG1Q3YBR2 411 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 OTUD3Q5T2D3 398 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-202ENST00000393773 ATAD3BQ5T9A4 648 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 SPATA19Q7Z5L4 167 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 POMGNT2Q8NAT1 580 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 OR9K2Q8NGE7 335 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 TUBGCP3Q96CW5 907 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 ALKBH3Q96Q83 286 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-202ENST00000393773 NAA11Q9BSU3 229 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-202ENST00000393773 NELFAQ9H3P2 528 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 SEC61A2Q9H9S3 476 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 ZDHHC2Q9UIJ5 367 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 PKD1L1Q8TDX9 2849 aa13.36□□□□□ -0.27
CHMP3-202ENST00000393773 MGAM2Q2M2H8 2515 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 AQP7P3A6NL99 342 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 FAAHO00519 579 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 STAMBPO95630 424 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 C1QCP02747 245 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 TACSTD2P09758 323 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 CECR9P0C854 216 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 TACR3P29371 465 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 SERPINB5P36952 375 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 P2RY4P51582 365 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 NAAAQ02083 359 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 LGALS3BPQ08380 585 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 ANKRD46Q86W74 232 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-202ENST00000393773 TMEM99Q8N816 258 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 OR8J2Q8NGG1 315 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 UBLCP1Q8WVY7 318 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-202ENST00000393773 XAGE5Q8WWM1 108 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 NEURL3Q96EH8 262 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
CHMP3-202ENST00000393773 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-202ENST00000393773 NOP53Q9NZM5 478 aaKnown RBP13.35□□□□□ -0.27
CHMP3-202ENST00000393773 CRNNQ9UBG3 495 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-202ENST00000393773 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 LIPT2A6NK58 231 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 LILRA1O75019 489 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 AKR7A3O95154 331 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 LGI1O95970 557 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 CRYAAP02489 173 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 OR4A8P0C604 315 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 RPS4Y1P22090 263 aaKnown RBP13.34□□□□□ -0.27
CHMP3-202ENST00000393773 UQCRC2P22695 453 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 CALCRP30988 508 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 SLC1A3P43003 542 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 IDH3GP51553 393 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-202ENST00000393773 HPCAP84074 193 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 EMX2Q04743 252 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms