RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ELMOD2Q8IZ81 293 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ZNF680Q8NEM1 530 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 OR14A16Q8NHC5 309 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 SNX33Q8WV41 574 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ZNRF4Q8WWF5 429 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 CMTM3Q96MX0 182 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 PDCD1LG2Q9BQ51 273 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ZNF275Q9NSD4 429 aaPredicted RBP17.31■□□□□ 0.36
CBX1-202ENST00000393408 NCDNQ9UBB6 729 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 EDNRAP25101 427 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 DIO1P49895 249 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 SRP54P61011 504 aaKnown RBP17.3■□□□□ 0.36
CBX1-202ENST00000393408 KIRREL2Q6UWL6 708 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 RNF44Q7L0R7 432 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 FGD2Q7Z6J4 655 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 IZUMO1Q8IYV9 350 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 OR4N2Q8NGD1 307 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 OR56B4Q8NH76 319 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 ZNF671Q8TAW3 534 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 BMFQ96LC9 184 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 GABRG3Q99928 467 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
CBX1-202ENST00000393408 COPS3Q9UNS2 423 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 A0A1B0GVI7 797 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 APBB3O95704 486 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 ADRB1P08588 477 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 SDHBP21912 280 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 NUDT1P36639 197 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 GDNFP39905 211 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 IKZF1Q13422 519 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 CAMK2DQ13557 499 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 ULK3Q6PHR2 472 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 CMTM4Q8IZR5 234 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 BEST4Q8NFU0 473 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 DERL3Q96Q80 235 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 ACTR6Q9GZN1 396 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 ADAM18Q9Y3Q7 739 aa17.3■□□□□ 0.36
CBX1-202ENST00000393408 TICRRQ7Z2Z1 1910 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 A0A1W2PQF6 199 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 LINC00862A6NCI5 91 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 GNB5O14775 395 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 ZNF749O43361 778 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 GUSBP08236 651 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 SLC35E2P0CK97 266 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 TYRP1P17643 537 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 S1PR1P21453 382 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 PSMB10P40306 273 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 FAM53BQ14153 422 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 PON3Q15166 354 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 MANEAQ5SRI9 462 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 RFPL4BQ6ZWI9 263 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 CSNK1A1LQ8N752 337 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 SGTBQ96EQ0 304 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 GFI1Q99684 422 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 TRANK1O15050 2925 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 CA3P07451 260 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 LGALS3BPQ08380 585 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 COL28A1Q2UY09 1125 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 SIGIRRQ6IA17 410 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 CCDC28AQ8IWP9 274 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 PHYHIPQ92561 330 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 SORCS2Q96PQ0 1159 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 RPP25Q9BUL9 199 aaKnown RBP17.29■□□□□ 0.36
CBX1-202ENST00000393408 NOX4Q9NPH5 578 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 DLL4Q9NR61 685 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.29■□□□□ 0.36
CBX1-202ENST00000393408 ANKRD10Q9NXR5 420 aa17.29■□□□□ 0.36
CBX1-202ENST00000393408 ZNF879B4DU55 563 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 PIN1P1O15428 100 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 SELENOFO60613 162 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 SRMP19623 302 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 RAB38P57729 211 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 FGFBP1Q14512 234 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 FAM199XQ6PEV8 388 aaPredicted RBP17.28■□□□□ 0.36
CBX1-202ENST00000393408 PARM1Q6UWI2 310 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 ZNF550Q7Z398 422 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 NPEPL1Q8NDH3 523 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 C7orf57Q8NEG2 295 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 FGF14Q92915 247 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 DDOQ99489 341 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 C20orf85Q9H1P6 137 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 PLEKHA1Q9HB21 404 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 MKKSQ9NPJ1 570 aaPredicted RBP17.28■□□□□ 0.36
CBX1-202ENST00000393408 STARD5Q9NSY2 213 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 RABL2AQ9UBK7 228 aaPredicted RBP17.28■□□□□ 0.36
CBX1-202ENST00000393408 RABL2BQ9UNT1 228 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 AUP1Q9Y679 476 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 C2orf74A8MZ97 194 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 GPRIN2O60269 458 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 OR10H2O60403 315 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 ICMTO60725 284 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 ZNF527Q8NB42 609 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 RPS4Y2Q8TD47 263 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 PATE1Q8WXA2 126 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 DACT3Q96B18 629 aaPredicted RBP17.28■□□□□ 0.36
CBX1-202ENST00000393408 RPS6KB2Q9UBS0 482 aa17.28■□□□□ 0.36
CBX1-202ENST00000393408 IMPA2O14732 288 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 SSNA1O43805 119 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms