RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 HRASLS2Q9NWW9 162 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 KCNJ5P48544 419 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 PTCRAQ6ISU1 281 aaPredicted RBP18.35■□□□□ 0.53
SHANK1-203ENST00000391813 OR4N5Q8IXE1 308 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SLC25A32Q9H2D1 315 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 APOBEC3BQ9UH17 382 aaKnown RBP18.35■□□□□ 0.53
SHANK1-203ENST00000391813 KCNK2O95069 426 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SIX6O95475 246 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 CPEP16870 476 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SLC2A5P22732 501 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 EVX1P49640 407 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 OR9A2Q8NGT5 310 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SPNS1Q9H2V7 528 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 ENY2Q9NPA8 101 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
SHANK1-203ENST00000391813 TAF1P21675 1872 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 SHOXO15266 292 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 C6P13671 934 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ARNTP27540 789 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 HOXC12P31275 282 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 CHRNEQ04844 493 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PAN3Q58A45 887 aaKnown RBP18.34■□□□□ 0.53
SHANK1-203ENST00000391813 CD163Q86VB7 1156 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZBTB44Q8NCP5 570 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 LINC01599Q8WXQ3 324 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ACTL7AQ9Y615 435 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 GYPBP06028 91 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PDE7AQ13946 482 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF480Q8WV37 535 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 NINJ1Q92982 152 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 MYADMQ96S97 322 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF442Q9H7R0 627 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 METTL7AQ9H8H3 244 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 A4GALTQ9NPC4 353 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 OBP2AQ9NY56 170 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 TESQ9UGI8 421 aaKnown RBP18.34■□□□□ 0.53
SHANK1-203ENST00000391813 WIF1Q9Y5W5 379 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZDHHC11BP0C7U3 371 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 HNRNPA2B1P22626 353 aaKnown RBP18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PLA2G7Q13093 441 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 BORCS8Q96FH0 119 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 TGM7Q96PF1 710 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PLSCR3Q9NRY6 295 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 IGLON5A6NGN9 336 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 A8MVJ9 347 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 H3BNC9 293 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 GABARAPH6UMI1 98 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 K7EPK0 472 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 IMPA2O14732 288 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 FBXO24O75426 580 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 CNR1P21554 472 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF84P51523 738 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 GLO1Q04760 184 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PDZK1IP1Q13113 114 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 BCL2A1Q16548 175 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 B3GLCTQ6Y288 498 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 FAM71E2Q8N5Q1 922 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 NEURL3Q96EH8 262 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 PTCHD1Q96NR3 888 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF629Q9UEG4 869 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-203ENST00000391813 SLC22A7Q9Y694 548 aa18.34■□□□□ 0.53
SHANK1-203ENST00000391813 CXCL10P02778 98 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 TPOP07202 933 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 GABRB1P18505 474 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 FPR3P25089 353 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 XCR1P46094 333 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 GPR139Q6DWJ6 353 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 SLC22A8Q8TCC7 542 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 SLAMF7Q9NQ25 335 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 TUBG2Q9NRH3 451 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 ICKQ9UPZ9 632 aa18.33■□□□□ 0.53
SHANK1-203ENST00000391813 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 FAM171A2A8MVW0 826 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 CDC123O75794 336 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-203ENST00000391813 FURINP09958 794 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 LIPCP11150 499 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 UBE2KP61086 200 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SYT14P1Q58G82 188 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 ZMAT1Q5H9K5 638 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 CLLU1Q5K131 121 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 STEAP1BQ6NZ63 245 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 MBOAT2Q6ZWT7 520 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 NDUFAF7Q7L592 441 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SULF2Q8IWU5 870 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 KLHDC8BQ8IXV7 354 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 CSNK1A1LQ8N752 337 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 ACOT4Q8N9L9 421 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 OR6F1Q8NGZ6 308 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SERINC2Q96SA4 455 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 HCAR1Q9BXC0 346 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 IFT22Q9H7X7 185 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 GPR34Q9UPC5 381 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-203ENST00000391813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-203ENST00000391813 TMEM200CA6NKL6 621 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 DUX1O43812 170 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 IFNGR1P15260 489 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 Q499Y3 187 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SOHLH1Q5JUK2 328 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms