RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 HHATLQ9HCP6 504 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 FARSBQ9NSD9 589 aaKnown RBP6.89□□□□□ -1.31
TRBV28-201ENST00000390400 SLC25A37Q9NYZ2 338 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF224Q9NZL3 707 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 SLC23A1Q9UHI7 598 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 SH2B3Q9UQQ2 575 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 PCDHGA1Q9Y5H4 931 aa6.89□□□□□ -1.31
TRBV28-201ENST00000390400 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 MEIKINA0A087WXM9 373 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SPAARA0A1B0GVQ0 90 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 MFSD2BA6NFX1 497 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SLC9B1P1A6NJY1 282 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 D6RAR5 112 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 HRKO00198 91 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR7A17O14581 309 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 AP3D1O14617 1153 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TOX3O15405 576 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SUV39H1O43463 412 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 CHST10O43529 356 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 GMDSO60547 372 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 RAD1O60671 282 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 UGDHO60701 494 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF254O75437 659 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 GPX5O75715 221 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 RGS11O94810 467 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 C1GALT1C1LP0DN25 315 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PVRP15151 417 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TSPAN8P19075 237 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 EPORP19235 508 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 MAGP20916 626 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PTPN6P29350 595 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 C21orf33P30042 268 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 GABRA5P31644 462 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 RPS19P39019 145 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 LIMS1P48059 325 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 CCT3P49368 545 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 EVX1P49640 407 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 NOVA1P51513 510 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SMIM11AP58511 58 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SSTP61278 116 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 REEP5Q00765 189 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 CHIT1Q13231 466 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 DOC2AQ14183 400 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF169Q14929 603 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SSX1Q16384 188 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TSTQ16762 297 aaKnown RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 FAM174BQ3ZCQ3 159 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PYDC2Q56P42 97 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 FAM209BQ5JX69 171 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PRR31Q5SQ13 230 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 HIST2H2AA3Q6FI13 130 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 GRHL2Q6ISB3 625 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TMEM71Q6P5X7 295 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TMEM81Q6P7N7 255 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 FIGLAQ6QHK4 219 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 KLHL17Q6TDP4 642 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TRILQ7L0X0 811 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 LRRC28Q86X40 367 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 LAX1Q8IWV1 398 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 HS3ST5Q8IZT8 346 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR8H3Q8N146 312 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 Q8N402 240 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TBC1D19Q8N5T2 526 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SLC37A3Q8NCC5 494 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR10G2Q8NGC3 310 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR52B6Q8NGF0 335 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR8J2Q8NGG1 315 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR4C15Q8NGM1 316 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 OR8J1Q8NGP2 316 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ST8SIA4Q92187 359 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 WDR34Q96EX3 536 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 KLHL15Q96M94 604 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PRAP1Q96NZ9 151 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 MAP3K3Q99759 626 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 AIF1LQ9BQI0 150 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 DPH7Q9BTV6 452 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 EFCAB11Q9BUY7 163 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 C1orf43Q9BWL3 253 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 PRRG3Q9BZD7 231 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 GHITMQ9H3K2 345 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 LRTM1Q9HBL6 345 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SERHLQ9NQF3 203 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 TMEM184CQ9NVA4 438 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ASB6Q9NWX5 421 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 SOHLH2Q9NX45 425 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 AKAP7Q9P0M2 348 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF490Q9ULM2 529 aaPredicted RBP6.88□□□□□ -1.31
TRBV28-201ENST00000390400 U3KQV3 271 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 V9GYQ6 96 aa6.88□□□□□ -1.31
TRBV28-201ENST00000390400 AHCTF1Q8WYP5 2266 aa6.87□□□□□ -1.31
TRBV28-201ENST00000390400 IGHV5-51A0A0C4DH38 117 aa6.87□□□□□ -1.31
TRBV28-201ENST00000390400 IGKV1-8A0A0C4DH67 115 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms