RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LATO43561 262 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 FCARP24071 287 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 LTB4RQ15722 352 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 KIAA1211LQ6NV74 962 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ADAMTSL4Q6UY14 1074 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 OR4N5Q8IXE1 308 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 BPIFCQ8NFQ6 507 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 DUSP19Q8WTR2 217 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ELP4Q96EB1 424 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 AIF1LQ9BQI0 150 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
SDC1-202ENST00000381150 FN3KQ9H479 309 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TM7SF3Q9NS93 570 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 PIPOXQ9P0Z9 390 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 IDSB3KWA1 339 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TO15178 435 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ERI3O43414 337 aaKnown RBP12.78□□□□□ -0.36
SDC1-202ENST00000381150 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ATP1B1P05026 303 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 PPP3CBP16298 524 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 DRD3P35462 400 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TAS2R38P59533 333 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TAF13Q15543 124 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 PCGF3Q3KNV8 242 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 DCAF12L2Q5VW00 463 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 GDF7Q7Z4P5 450 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 OR9A2Q8NGT5 310 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 OR4K13Q8NH42 304 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 OR1S1Q8NH92 325 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 NANPQ8TBE9 248 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 SYNPRQ8TBG9 265 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ACOT11Q8WXI4 607 aaPredicted RBP12.78□□□□□ -0.36
SDC1-202ENST00000381150 MRPS24Q96EL2 167 aaKnown RBP12.78□□□□□ -0.36
SDC1-202ENST00000381150 SEC22AQ96IW7 307 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TEAD3Q99594 435 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 NOX4Q9NPH5 578 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 C20orf141Q9NUB4 165 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 GTF2A1LQ9UNN4 478 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 ICKQ9UPZ9 632 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
SDC1-202ENST00000381150 RIIAD1A6NNX1 92 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 ECDO95905 644 aaPredicted RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 GABRA1P14867 456 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 AP3S2P59780 193 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 EFNB1P98172 346 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 ID2Q02363 134 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 SCRN3Q0VDG4 424 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 NIPAL3Q6P499 406 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 PEX11GQ96HA9 241 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 AMDHD1Q96NU7 426 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 CAMK1GQ96NX5 476 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 RHBGQ9H310 441 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 ZCCHC4Q9H5U6 513 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 ASF1BQ9NVP2 202 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 MRPS18AQ9NVS2 196 aaKnown RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 DPP7Q9UHL4 492 aa12.77□□□□□ -0.36
SDC1-202ENST00000381150 CDV3Q9UKY7 258 aaKnown RBP12.77□□□□□ -0.36
SDC1-202ENST00000381150 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 A0A0G2JK05 382 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 F5H5P2 479 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 UGT2B7P16662 529 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 KRT33BQ14525 404 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 METRNLQ641Q3 311 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 SDR9C7Q8NEX9 313 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 TFGQ92734 400 aaPredicted RBP12.77□□□□□ -0.37
SDC1-202ENST00000381150 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 THAP10Q9P2Z0 257 aaPredicted RBP12.77□□□□□ -0.37
SDC1-202ENST00000381150 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 A8MXK9 166 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 NDUFS4O43181 175 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 KCNAB3O43448 404 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 ARL6IP5O75915 188 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.37
SDC1-202ENST00000381150 CAPZA2P47755 286 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 H2BFSP57053 126 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
SDC1-202ENST00000381150 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 SLC25A28Q96A46 364 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 S100A16Q96FQ6 103 aaKnown RBP12.77□□□□□ -0.37
SDC1-202ENST00000381150 CRB3Q9BUF7 120 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 EXO5Q9H790 373 aa12.77□□□□□ -0.37
SDC1-202ENST00000381150 PTP4A3O75365 173 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 RASGRP1O95267 797 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 SERPINA3P01011 423 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 MAS1P04201 325 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 KCNJ3P48549 501 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 ART1P52961 327 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 CTAG1AP78358 180 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 GXYLT1Q4G148 440 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms