RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TMEM27Q9HBJ8 222 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SIDT1Q9NXL6 827 aaKnown RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SEC16AO15027 2179 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 FRYLO94915 3013 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SURF4O15260 269 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 HBQ1P09105 142 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SSTR2P30874 369 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ETV5P41161 510 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ACAA2P42765 397 aaKnown RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ETV1P50549 477 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 FXYD6P3P58550 94 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 B2MP61769 119 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SPHARQ15513 63 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 C1orf189Q5VU69 101 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 UBALD2Q8IYN6 164 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 C19orf18Q8NEA5 215 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 OR4C3Q8NH37 302 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SENP5Q96HI0 755 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 DPCDQ9BVM2 203 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 POLR2J2Q9GZM3 115 aaKnown RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ENKD1Q9H0I2 346 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 PLEKHB1Q9UF11 243 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 WDFY4Q6ZS81 3184 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 A0A1B0GX12 115 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 GTPBP1O00178 669 aaKnown RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 GNB5O14775 395 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SEC14L5O43304 696 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SOX30O94993 753 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 RAB36O95755 333 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SCG5P05408 212 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 ARRB1P49407 418 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 CLDN20P56880 219 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 LYSMD4Q5XG99 296 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 GPR135Q8IZ08 494 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 Q8N402 240 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 D2HGDHQ8N465 521 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 NANOGP1Q8N7R0 232 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 BBS1Q8NFJ9 593 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OR11H4Q8NGC9 324 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OR13C2Q8NGS9 318 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 CEP76Q8TAP6 659 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 PTPMT1Q8WUK0 201 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 CCDC74AQ96AQ1 378 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 HEXA-AS1Q9H8Q6 139 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 MEPEQ9NQ76 525 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 GMEB2Q9UKD1 530 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 LYRM1O43325 122 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 MTNR1AP48039 350 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 EFNA3P52797 238 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 GAS1P54826 345 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 CDH11P55287 796 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 FCN2Q15485 313 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 VWA2Q5GFL6 755 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 C22orf42Q6IC83 251 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SMARCD3Q6STE5 483 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 SLC25A46Q96AG3 418 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OTULINQ96BN8 352 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 G6PC3Q9BUM1 346 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 OR8D2Q9GZM6 311 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 MS4A7Q9GZW8 240 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 RACGAP1Q9H0H5 632 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 PPA2Q9H2U2 334 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-201ENST00000380829 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 MED31Q9Y3C7 131 aa13.09□□□□□ -0.31
CLCN4-201ENST00000380829 FAM183AA6NL82 134 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-201ENST00000380829 NPIPB9F8W1W9 429 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 RAF1P04049 648 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 FCER2P06734 321 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 PSMA1P25786 263 aaKnown RBP13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ATP12AP54707 1039 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 RIN1Q13671 783 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms