RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 OR4K15Q8NH41 348 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 STOML3Q8TAV4 291 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SMIM4Q8WVI0 70 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 HPSE2Q8WWQ2 592 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SOCS4Q8WXH5 440 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 MYLIPQ8WY64 445 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 TMEM203Q969S6 136 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 NOL4LQ96MY1 436 aaPredicted RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SMIM14Q96QK8 99 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ALG8Q9BVK2 526 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 TMED9Q9BVK6 235 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SNHG12Q9BXW3 62 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 DERL2Q9GZP9 239 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 BCO1Q9HAY6 547 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 GOLT1BQ9Y3E0 138 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ATG4BQ9Y4P1 393 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 HS3ST4Q9Y661 456 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 DOCK4Q8N1I0 1966 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 NUP214P35658 2090 aaPredicted RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ZNF749O43361 778 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 BCL2L11O43521 198 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 MOSPD3O75425 235 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 IGSF6O95976 241 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 PLGP00747 810 aaPredicted RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 CD5P06127 495 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 OR12D1P0DN82 309 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 RHOQP17081 205 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 MAP3K8P41279 467 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 CDKN1BP46527 198 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ACVR1Q04771 509 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 EGR3Q06889 387 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 MTAPQ13126 283 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 XKR4Q5GH76 650 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SIRPB2Q5JXA9 342 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 DCAF12L2Q5VW00 463 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 KIAA1161Q6NSJ0 714 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 TCTN3Q6NUS6 607 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 DEF8Q6ZN54 512 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 UBE2R2Q712K3 238 aaPredicted RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 SLC24A5Q71RS6 500 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 YAF2Q8IY57 180 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 LGI4Q8N135 537 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 TOMM5Q8N4H5 51 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 WFIKKN2Q8TEU8 576 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 UCN2Q96RP3 112 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 RSRP1Q9BUV0 290 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 IFT27Q9BW83 186 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 GSX1Q9H4S2 264 aaPredicted RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ZFYVE1Q9HBF4 777 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 ACER3Q9NUN7 267 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 FAM86C1Q9NVL1 165 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 RPL36Q9Y3U8 105 aaKnown RBP6.09□□□□□ -1.43
RIPK1-202ENST00000380409 MTCH2Q9Y6C9 303 aa6.09□□□□□ -1.43
RIPK1-202ENST00000380409 TNRC18O15417 2968 aaPredicted RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 MYADML2A6NDP7 307 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 CLIC1O00299 241 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 TNFRSF11BO00300 401 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 OR7A17O14581 309 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 OGG1O15527 345 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ECI2O75521 394 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 B3GALT4O96024 378 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 LIMS3P0CW19 117 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 LIMS4P0CW20 117 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ACRP10323 421 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 RPL3P39023 403 aaKnown RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ARHGAP40Q5TG30 622 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 IL34Q6ZMJ4 242 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 PTCHD4Q6ZW05 846 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 GID4Q8IVV7 300 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 KRTCAP2Q8N6L1 136 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 PLPP7Q8NBV4 271 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 SLC24A4Q8NFF2 622 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 OR9A1PQ8NGU1 263 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 APOBEC4Q8WW27 367 aaKnown RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 C14orf79Q96F83 325 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 COPS8Q99627 209 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 FUZQ9BT04 418 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 TSSK6Q9BXA6 273 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 CHIAQ9BZP6 476 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 TGIF2Q9GZN2 237 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 MMP26Q9NRE1 261 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ASB6Q9NWX5 421 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ELOVL2Q9NXB9 296 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 MARCH4Q9P2E8 410 aaPredicted RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 SLC9A8Q9Y2E8 581 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 NME7Q9Y5B8 376 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 SPIN1Q9Y657 262 aaPredicted RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ANKRD61A6NGH8 418 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 F8VVB4 439 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 F8VWA3 439 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 MASP2O00187 686 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 SAP18O00422 153 aaKnown RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 CLDN11O75508 207 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ETFAP13804 333 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 OPRD1P41143 372 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 XCR1P46094 333 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 C1DQ13901 141 aaKnown RBP6.08□□□□□ -1.44
RIPK1-202ENST00000380409 RAB35Q15286 201 aa6.08□□□□□ -1.44
RIPK1-202ENST00000380409 ALG11Q2TAA5 492 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms