RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CHRNA9Q9UGM1 479 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 A0A087WUJ7 227 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 FITM1A5D6W6 292 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 C4orf47A7E2U8 309 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 C17orf51A8MQB3 221 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 J3QLW9 94 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CPNE3O75131 537 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SOX30O94993 753 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF19P17023 458 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF3P17036 446 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 BCKDHBP21953 392 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 APEX1P27695 318 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC6A6P31641 620 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 P2RY14Q15391 338 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 C14orf28Q4W4Y0 310 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 KLHL26Q53HC5 615 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 OGFOD3Q6PK18 319 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ARL9Q6T311 187 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 UBE2J2Q8N2K1 259 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ZPLD1Q8TCW7 415 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 THAP3Q8WTV1 239 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TP53INP1Q96A56 240 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 C3orf49Q96BT1 292 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ZMYND19Q96E35 227 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 C4orf36Q96KX1 117 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 GMEB2Q9UKD1 530 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 IER3IP1Q9Y5U9 82 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 FRYLO94915 3013 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 IGKV1D-42A0A075B6H8 117 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 RHPN2P1A8MT19 583 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM150CB9EJG8 249 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 POLR1CO15160 346 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TMCC2O75069 709 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TFP02787 698 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SHC1P29353 583 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC37A1P57057 533 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 NXPH1P58417 271 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 COPZ1P61923 177 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 HNRNPKP61978 463 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC3A1Q07837 685 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 BCL2A1Q16548 175 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TCTE1Q5JU00 501 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 PRR22Q8IZ63 422 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 OR5J2Q8NH18 312 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ITPKCQ96DU7 683 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TXNDC15Q96J42 360 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 RTN4RQ9BZR6 473 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 OR8D2Q9GZM6 311 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 NXF5Q9H1B4 397 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ERVMER34-1Q9H9K5 563 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CUTCQ9NTM9 273 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SERTAD3Q9UJW9 196 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 BLACEA4D250 179 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CDC14CA4D256 554 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 EFCAB7A8K855 629 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 A8MU76 341 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 H0YIG0 161 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 GMFGO60234 142 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 OR2B3O76000 313 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 APOA1P02647 267 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ACVR1BP36896 505 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 FOXL2P58012 376 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 BPIFB3P59826 476 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 GRM7Q14831 915 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SMAD2Q15796 467 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 PYDC2Q56P42 97 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 VWA2Q5GFL6 755 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ARMC4Q5T2S8 1044 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 FNDC7Q5VTL7 733 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CNIH2Q6PI25 160 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 XKRXQ6PP77 449 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 LYPD4Q6UWN0 246 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM98AQ8NCA5 519 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 OR13C5Q8NGS8 318 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ADAMTS18Q8TE60 1221 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TMCO6Q96DC7 493 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 SGTBQ96EQ0 304 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 NMNAT3Q96T66 252 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 NRSN2Q9GZP1 204 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 CHRDQ9H2X0 955 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 MKKSQ9NPJ1 570 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 TRIM36Q9NQ86 728 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 KLHL1Q9NR64 748 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 ICAM5Q9UMF0 924 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 POLHQ9Y253 713 aa7.29□□□□□ -1.24
PDLIM5-204ENST00000380176 RGS9O75916 674 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PIAS2O75928 621 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 NDUFB2O95178 105 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 MST1P26927 711 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 NAA10P41227 235 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 CASP3P42574 277 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 BDH1Q02338 343 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 KRR1Q13601 381 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 TP53I3Q53FA7 332 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ARHGAP11AQ6P4F7 1023 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms