RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 ZNF527Q8NB42 609 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 ABHD4Q8TB40 342 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 HLA-CQ95604 372 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 TXNDC15Q96J42 360 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 LCORQ96JN0 433 aaPredicted RBP17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 PELOQ9BRX2 385 aaKnown RBP17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 KCNN2Q9H2S1 579 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 ZNF337Q9Y3M9 751 aa17.58■□□□□ 0.41
PCDHA4-201ENST00000378125 WDFY3Q8IZQ1 3526 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 MN1Q10571 1320 aaPredicted RBP17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FAM25AB3EWG3 89 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FAM25CB3EWG5 89 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FAM25GB3EWG6 89 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 ZNF264O43296 627 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 DUX1O43812 170 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 F13BP05160 661 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FBLP22087 321 aaKnown RBP17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 CASP3P42574 277 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 NR0B1P51843 470 aaKnown RBP17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 EPHA4P54764 986 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 STARD6P59095 220 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FNDC7Q5VTL7 733 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 WBP2NLQ6ICG8 309 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 TSSK4Q6SA08 328 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 PLXDC1Q8IUK5 500 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 GHSRQ92847 366 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 Q96M85 177 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 TSSK2Q96PF2 358 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 DEPDC7Q96QD5 511 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 RAB33BQ9H082 229 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 C11orf54Q9H0W9 315 aaPredicted RBP17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 ZNF304Q9HCX3 659 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 INPP5EQ9NRR6 644 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 MKL2Q9ULH7 1088 aa17.58■□□□□ 0.4
PCDHA4-201ENST00000378125 FRYLO94915 3013 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 TEX13CA0A0J9YWL9 993 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 DYRK3O43781 588 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 AFF3P51826 1226 aaKnown RBP17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 ARHGAP40Q5TG30 622 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 SYT9Q86SS6 491 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 MARCH3Q86UD3 253 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 NPEPL1Q8NDH3 523 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 SLC46A1Q96NT5 459 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 CNN2Q99439 309 aaKnown RBP17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 MESP1Q9BRJ9 268 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 PCDHGB2Q9Y5G2 931 aa17.57■□□□□ 0.4
PCDHA4-201ENST00000378125 PLPP2O43688 288 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 WISP1O95388 367 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 PSMB10P40306 273 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 GPR50Q13585 617 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 PON3Q15166 354 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 DPY19L2P2Q6ZN68 376 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 LANCL3Q6ZV70 420 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ATG4DQ86TL0 474 aaPredicted RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 C9orf40Q8IXQ3 194 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 SPEM1Q8N4L4 309 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 SLC35B4Q969S0 331 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ADIPOR1Q96A54 375 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ITPKCQ96DU7 683 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 HAO2Q9NYQ3 351 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 GNG8Q9UK08 70 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ATXN7L1Q9ULK2 861 aaPredicted RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 COPS3Q9UNS2 423 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 IGKV3D-11A0A0A0MRZ8 115 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 IGHV3-20A0A0C4DH32 117 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 NUDT21O43809 227 aaKnown RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 PPM1BO75688 479 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 IGKV3-11P04433 115 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ELK1P19419 428 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ITPKBP27987 946 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 GRK6P43250 576 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 EGR4Q05215 589 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 TOMM34Q15785 309 aaPredicted RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 ZSWIM7Q19AV6 140 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 LEG1Q6P5S2 330 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 EGFL6Q8IUX8 553 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 GPALPP1Q8IXQ4 340 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 SLC35F2Q8IXU6 374 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 Q8N402 240 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 GDPD1Q8N9F7 314 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 FAM71CQ8NEG0 241 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 SETD6Q8TBK2 473 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 KTI12Q96EK9 354 aaPredicted RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 PGLYRP3Q96LB9 341 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 B3GAT2Q9NPZ5 323 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 NRIP3Q9NQ35 241 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 RPRD1BQ9NQG5 326 aaKnown RBP17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 NANSQ9NR45 359 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 MMACHCQ9Y4U1 282 aa17.56■□□□□ 0.4
PCDHA4-201ENST00000378125 IDSB3KWA1 339 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 H7C1C5 153 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 HCRTR2O43614 444 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 NUDT14O95848 222 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 SLC2A2P11168 524 aaPredicted RBP17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 SPI1P17947 270 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 TACR3P29371 465 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 GALNSP34059 522 aa17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 CDKN2AP42771 156 aaKnown RBP17.55■□□□□ 0.4
PCDHA4-201ENST00000378125 EVX1P49640 407 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms