RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C12orf49Q9H741 205 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SYNPO2LQ9H987 977 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 VAPAQ9P0L0 249 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 KLHL21Q9UJP4 597 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 K7ESM1 405 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PRICKLE3O43900 615 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ALDOCP09972 364 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ITGB8P26012 769 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 CLDN8P56748 225 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ACTA2P62736 377 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ACTG2P63267 376 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 CCSMST1Q4G0I0 132 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 TEX26Q8N6G2 289 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 LMF2Q9BU23 707 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 RANGRFQ9HD47 186 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ZNF71Q9NQZ8 489 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 FBXO4Q9UKT5 387 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 B3GNT3Q9Y2A9 372 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SNX11Q9Y5W9 270 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 LY75O60449 1722 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 TRIP11Q15643 1979 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SLC22A31A6NKX4 558 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 METTL12A8MUP2 240 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SGCEO43556 437 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PRLHRP49683 370 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 NKX6-1P78426 367 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 KEAP1Q14145 624 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 TMEM52BQ4KMG9 183 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SLC18B1Q6NT16 456 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PLBD1Q6P4A8 553 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 NAGSQ8N159 534 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 DCUN1D4Q92564 292 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 TRIB1Q96RU8 372 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SULT4A1Q9BR01 284 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PROCRQ9UNN8 238 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 NKX6-3A6NJ46 265 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ANHXE9PGG2 379 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SCAMP2O15127 329 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 SLC22A5O76082 557 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 OR8U9P0C7N5 309 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ALDH3B1P43353 468 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PPIAP62937 165 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 EMX1Q04741 257 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 PCGF3Q3KNV8 242 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 BORAQ6PGQ7 559 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 OR2T4Q8NH00 348 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 CNN2Q99439 309 aaKnown RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 MICU1Q9BPX6 476 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 ZNF436Q9C0F3 470 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-205ENST00000377670 RXFP3Q9NSD7 469 aa10.07□□□□□ -0.8
HIF3A-205ENST00000377670 TMEM202A6NGA9 273 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 TNFSF14O43557 240 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 CHRM4P08173 479 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 CASP3P42574 277 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 POU4F2Q12837 409 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 METTL11BQ5VVY1 283 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 OR7G1Q8NGA0 311 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 FKRPQ9H9S5 495 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 ACOT13Q9NPJ3 140 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 IGLV3-10A0A075B6K4 115 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 A0A1W2PPC1 479 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
HIF3A-205ENST00000377670 OIP5O43482 229 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 TSPAN15O95858 294 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 IFNA1P01562 189 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 TMEM225BP0DP42 221 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 SDC1P18827 310 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 ENPP1P22413 925 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 AOAHP28039 575 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 RPS23P62266 143 aaKnown RBP10.06□□□□□ -0.8
HIF3A-205ENST00000377670 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 MICAQ29983 383 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 FAM205BPQ63HN1 556 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 LYPD8Q6UX82 237 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 KCTD20Q7Z5Y7 419 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 ZNF619Q8N2I2 560 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 FRMD1Q8N878 549 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 THAP7Q9BT49 309 aaPredicted RBP10.06□□□□□ -0.8
HIF3A-205ENST00000377670 LUZP4Q9P127 313 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 A0A1W2PQ09 198 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 DIRAS3O95661 229 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 CRABP1P29762 137 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 LEG1Q6P5S2 330 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 SLC16A14Q7RTX9 510 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 ZNF740Q8NDX6 193 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 OR5K2Q8NHB8 316 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
HIF3A-205ENST00000377670 NMNAT1Q9HAN9 279 aaPredicted RBP10.06□□□□□ -0.8
HIF3A-205ENST00000377670 RIMS3Q9UJD0 308 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 SHROOM3Q8TF72 1996 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 PMS2P1A4D2B8 440 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 PHYHO14832 338 aa10.06□□□□□ -0.8
HIF3A-205ENST00000377670 ARPC1BO15143 372 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms