RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 BEX4Q9NWD9 120 aaPredicted RBP14.9□□□□□ -0.02
HMGN4-201ENST00000377575 RPS6KB2Q9UBS0 482 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 SLC9A8Q9Y2E8 581 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 DSCAMO60469 2012 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 PRORSD1PA6NEY8 169 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 KLF4O43474 513 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 FRS3O43559 492 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 MRPL33O75394 65 aaKnown RBP14.89□□□□□ -0.03
HMGN4-201ENST00000377575 CD53P19397 219 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 COX5AP20674 150 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 LOXP28300 417 aaPredicted RBP14.89□□□□□ -0.03
HMGN4-201ENST00000377575 NCALDP61601 193 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 NFYCQ13952 458 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 CEACAM7Q14002 265 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 OR7A5Q15622 319 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 TSC22D1Q15714 1073 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 CYP51A1Q16850 503 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 RUNDC3AQ59EK9 446 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 DHRS4L2Q6PKH6 230 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 SSX8Q7RTT4 187 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.89□□□□□ -0.03
HMGN4-201ENST00000377575 CCDC103Q8IW40 242 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 UBE2J2Q8N2K1 259 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 PLPPR2Q96GM1 343 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 CGREF1Q99674 301 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 FGFR1OP2Q9NVK5 253 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 SLC13A4Q9UKG4 626 aa14.89□□□□□ -0.03
HMGN4-201ENST00000377575 LIPT2A6NK58 231 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM229AB2RXF0 380 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 SERPINB7O75635 380 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 LYZL6O75951 148 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 VIMP08670 466 aaKnown RBP14.88□□□□□ -0.03
HMGN4-201ENST00000377575 BNIP2Q12982 314 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 CAPRIN1Q14444 709 aaKnown RBP14.88□□□□□ -0.03
HMGN4-201ENST00000377575 ACKR1Q16570 336 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 OTUD3Q5T2D3 398 aaPredicted RBP14.88□□□□□ -0.03
HMGN4-201ENST00000377575 C1orf140Q5VVS0 124 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 FBXW9Q5XUX1 488 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 ALKBH2Q6NS38 261 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 CASP12Q6UXS9 341 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 ATG4DQ86TL0 474 aaPredicted RBP14.88□□□□□ -0.03
HMGN4-201ENST00000377575 C11orf65Q8NCR3 313 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 STK35Q8TDR2 534 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 PIGTQ969N2 578 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 ANKRD27Q96NW4 1050 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 CCL19Q99731 98 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 EVA1AQ9H8M9 152 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 C12orf10Q9HB07 376 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 MED4Q9NPJ6 270 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 PARPBPQ9NWS1 579 aa14.88□□□□□ -0.03
HMGN4-201ENST00000377575 PRR14LQ5THK1 2151 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 MAP1AP78559 2803 aaPredicted RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 AQP7P3A6NL99 342 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ELOA3DA6NLF2 546 aaPredicted RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 RAMP1O60894 148 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 AHSA1O95433 338 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 GGT1P19440 569 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 IGHV1-2P23083 117 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 EDNRAP25101 427 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 AQP1P29972 269 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ADSLP30566 484 aaPredicted RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ARFIP2P53365 341 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 MTPNP58546 118 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 HOXC5Q00444 222 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 RBBP4Q09028 425 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 SLC17A1Q14916 467 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 TAB1Q15750 504 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 STK11Q15831 433 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ADRM1Q16186 407 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ELOA3BQ3SY89 546 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ZNF704Q6ZNC4 412 aaPredicted RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 P2RY8Q86VZ1 359 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 TGIF2LYQ8IUE0 185 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ARMC8Q8IUR7 673 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 SLC30A8Q8IWU4 369 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ELOA3Q8NG57 546 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 PIP5K1AQ99755 562 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 SF3B5Q9BWJ5 86 aaKnown RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 PIF1Q9H611 641 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ESRP2Q9H6T0 727 aaKnown RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ASB6Q9NWX5 421 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 ADPRHL2Q9NX46 363 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 MALT1Q9UDY8 824 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 TESQ9UGI8 421 aaKnown RBP14.87□□□□□ -0.03
HMGN4-201ENST00000377575 FLVCR1Q9Y5Y0 555 aa14.87□□□□□ -0.03
HMGN4-201ENST00000377575 NPIPB7O75200 414 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 AKR7A3O95154 331 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 IGHV3-9P01782 118 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 GTF2E2P29084 291 aaKnown RBP14.86□□□□□ -0.03
HMGN4-201ENST00000377575 RGS8P57771 180 aaPredicted RBP14.86□□□□□ -0.03
HMGN4-201ENST00000377575 PPA1Q15181 289 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 MAPRE2Q15555 327 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TRMT5Q32P41 509 aaKnown RBP14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TIMM23BQ5SRD1 257 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 C5orf46Q6UWT4 87 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 C6orf89Q6UWU4 347 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 GPAT4Q86UL3 456 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 TMEM99Q8N816 258 aa14.86□□□□□ -0.03
HMGN4-201ENST00000377575 LSMEM1Q8N8F7 131 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms