RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CNIH2Q6PI25 160 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 HAGHLQ6PII5 290 aaPredicted RBP12.65□□□□□ -0.38
GPC6-201ENST00000377047 TSSK4Q6SA08 328 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
GPC6-201ENST00000377047 ZNF649Q9BS31 505 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 C1orf198Q9H425 327 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 V9GY05 133 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 METTL15A6NJ78 407 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 GCAP28676 217 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 LIM2P55344 173 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 C5orf46Q6UWT4 87 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 TAPBPO15533 448 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 PFN3P60673 137 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 SLC16A9Q7RTY1 509 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 OR5M1Q8NGP8 315 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 SULT4A1Q9BR01 284 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 CXorf36Q9H7Y0 433 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 DUSP13Q9UII6 198 aa12.65□□□□□ -0.39
GPC6-201ENST00000377047 POM121BA6NF01 834 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 HSPB6O14558 160 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 LEXMQ3ZCV2 418 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 RNF113BQ8IZP6 322 aaKnown RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 L3MBTL4Q8NA19 623 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SLC29A1Q99808 456 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 ATG4BQ9Y4P1 393 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 OPRD1P41143 372 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SLC48A1Q6P1K1 146 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SNAPC3Q92966 411 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 CPPED1Q9BRF8 314 aaPredicted RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 CSF1P09603 554 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 FCGR2AP12318 317 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 ABHD17CQ6PCB6 329 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 COX15Q7KZN9 410 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 WBP2Q969T9 261 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 TNFRSF13CQ96RJ3 184 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 SPIN2AQ99865 258 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SPIN2BQ9BPZ2 258 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 INPP5EQ9NRR6 644 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 AKAIN1P0CW23 69 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 ITGAMP11215 1152 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 CX3CR1P49238 355 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 SIMC1Q8NDZ2 872 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 METTL9Q9H1A3 318 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 OR51E2Q9H255 320 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 NME7Q9Y5B8 376 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 D6RAR5 112 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 CDK1P06493 297 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 NPPBP16860 134 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 IGFBP6P24592 240 aaPredicted RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 EIF1P41567 113 aaKnown RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
GPC6-201ENST00000377047 SLC35F3Q8IY50 421 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 LHX6Q9UPM6 363 aa12.64□□□□□ -0.39
GPC6-201ENST00000377047 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 IL7P13232 177 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
GPC6-201ENST00000377047 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 MRI1Q9BV20 369 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 GHRLQ9UBU3 117 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 DOK2O60496 412 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ALDOBP05062 364 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ITGB2P05107 769 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 MSR1P21757 451 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 OR8B8Q15620 311 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 MRGPRX1Q96LB2 322 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 TMEM9BQ9NQ34 198 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 TAF1P21675 1872 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
GPC6-201ENST00000377047 EIF1BO60739 113 aaKnown RBP12.63□□□□□ -0.39
GPC6-201ENST00000377047 GASTP01350 101 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ACP2P11117 423 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 PPP5CP53041 499 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.396e-8■■■■■ 28.3
GPC6-201ENST00000377047 ZNF814B7Z6K7 855 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 WNT11O96014 354 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 OR8G3PP0DMU2 310 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 TAS2R31P59538 309 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 LHX8Q68G74 356 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms