RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SPATA2Q9UM82 520 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 HCRTR1O43613 425 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 RPL4P36578 427 aaKnown RBP23.22■■□□□ 1.31
C9orf40-201ENST00000376854 CCR6P51684 374 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 PPP1CAP62136 330 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 C19orf57Q0VDD7 668 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 CD276Q5ZPR3 534 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 OVCH1Q7RTY7 1134 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ZNF550Q7Z398 422 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 OR9A4Q8NGU2 314 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ZNF671Q8TAW3 534 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ZNF431Q8TF32 576 aaPredicted RBP23.22■■□□□ 1.31
C9orf40-201ENST00000376854 MRGPRX1Q96LB2 322 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 PDCD1LG2Q9BQ51 273 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 RANBP3Q9H6Z4 567 aaPredicted RBP23.22■■□□□ 1.31
C9orf40-201ENST00000376854 NRIP3Q9NQ35 241 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 MGAT4AQ9UM21 535 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 TIGD4Q8IY51 512 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 OR51Q1Q8NH59 317 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 OR14A16Q8NHC5 309 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 C17orf50Q8WW18 174 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ADAMTS14Q8WXS8 1223 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ORAI3Q9BRQ5 295 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ZFP64Q9NPA5 681 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 POT1Q9NUX5 634 aa23.22■■□□□ 1.31
C9orf40-201ENST00000376854 ANXA3P12429 323 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 LGALS3BPQ08380 585 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 HSD17B12Q53GQ0 312 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 BAIAP2L2Q6UXY1 529 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 ZNRF4Q8WWF5 429 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 MFRPQ9BY79 579 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 S1PR5Q9H228 398 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 NCDNQ9UBB6 729 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 ARHGEF17Q96PE2 2063 aaPredicted RBP23.21■■□□□ 1.31
C9orf40-201ENST00000376854 MT-ND4P03905 459 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 PSMB10P40306 273 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 DIO1P49895 249 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 SRSF5Q13243 272 aaKnown RBP23.21■■□□□ 1.31
C9orf40-201ENST00000376854 CAMK2BQ13554 666 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 FGFBP1Q14512 234 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 NDUFAF6Q330K2 333 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 MTFR2Q6P444 385 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 ZNF782Q6ZMW2 699 aaPredicted RBP23.21■■□□□ 1.31
C9orf40-201ENST00000376854 PRSS45Q7RTY3 260 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 SLITRK4Q8IW52 837 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 LGALS14Q8TCE9 139 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 NMNAT3Q96T66 252 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 COPS3Q9UNS2 423 aa23.21■■□□□ 1.31
C9orf40-201ENST00000376854 HRKO00198 91 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 SELENOFO60613 162 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 ANKRD34CP0C6C1 535 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 CXCL3P19876 107 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 GPR143P51810 404 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 DEFB110Q30KQ9 67 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 IZUMO1Q8IYV9 350 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 OR8H1Q8NGG4 311 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 RIT1Q92963 219 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 MRPL38Q96DV4 380 aaKnown RBP23.2■■□□□ 1.3
C9orf40-201ENST00000376854 C7orf50Q9BRJ6 194 aaKnown RBP23.2■■□□□ 1.3
C9orf40-201ENST00000376854 DTX4Q9Y2E6 619 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 TRABD2BA6NFA1 517 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 CTSBP07858 339 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 GUSBP08236 651 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF141Q15928 474 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 Q6ZSR6 202 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF761Q86XN6 746 aaPredicted RBP23.2■■□□□ 1.3
C9orf40-201ENST00000376854 C7orf57Q8NEG2 295 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 VSTM2LQ96N03 204 aa23.2■■□□□ 1.3
C9orf40-201ENST00000376854 FAM221BA6H8Z2 402 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 NDUFB5O43674 189 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 GSTZ1O43708 216 aaPredicted RBP23.19■■□□□ 1.3
C9orf40-201ENST00000376854 CD1AP06126 327 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 H2AFB2P0C5Z0 115 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 SNTB2Q13425 540 aaKnown RBP23.19■■□□□ 1.3
C9orf40-201ENST00000376854 GSG1Q2KHT4 349 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 GXYLT1Q4G148 440 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 UBE2NLQ5JXB2 153 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 DPY19L2P2Q6ZN68 376 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 FRMD1Q8N878 549 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 NPEPL1Q8NDH3 523 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 RCBTB1Q8NDN9 531 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 HSPA12BQ96MM6 686 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 GPR137Q96N19 417 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 ZNF879B4DU55 563 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 IMPA2O14732 288 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 WNT1P04628 370 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 OR3A3P47888 321 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 UBE2IP63279 158 aaKnown RBP23.19■■□□□ 1.3
C9orf40-201ENST00000376854 KLF9Q13886 244 aaPredicted RBP23.19■■□□□ 1.3
C9orf40-201ENST00000376854 SLC22A10Q63ZE4 541 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 TMEM92Q6UXU6 159 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 LUZP2Q86TE4 346 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 OR6K6Q8NGW6 343 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 SMIM4Q8WVI0 70 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 RBM18Q96H35 190 aaKnown RBP23.19■■□□□ 1.3
C9orf40-201ENST00000376854 DERL3Q96Q80 235 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 AUNIPQ9H7T9 357 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 FAM60AQ9NP50 221 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 NOX4Q9NPH5 578 aa23.19■■□□□ 1.3
C9orf40-201ENST00000376854 PCDHGA9Q9Y5G4 932 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms